RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 EDEM2Q9BV94 578 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 DUSP15Q9H1R2 295 aaPredicted RBP13.57□□□□□ -0.24
SNX29-207ENST00000568949 GKN1Q9NS71 199 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 KIAA1024Q9UPX6 916 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 WASF3Q9UPY6 502 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 SLC27A5Q9Y2P5 690 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 STK24Q9Y6E0 443 aa13.57□□□□□ -0.24
SNX29-207ENST00000568949 HIP1RO75146 1068 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 PAX3P23760 479 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 FXR2P51116 673 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNX29-207ENST00000568949 STRN3Q13033 797 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 MAPK7Q13164 816 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 RUNX3Q13761 415 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 KARSQ15046 597 aaKnown RBP13.56□□□□□ -0.24
SNX29-207ENST00000568949 SAFBQ15424 915 aaKnown RBP eCLIP13.56□□□□□ -0.24
SNX29-207ENST00000568949 ZNF174Q15697 407 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 DAB2IPQ5VWQ8 1189 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 OVOS1Q6IE37 1185 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 ARMCX5Q6P1M9 558 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 ZPBP2Q6X784 338 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 DSTYKQ6XUX3 929 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 NECAB1Q8N987 351 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 GCNAQ96QF7 691 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 TMEM121BQ9BXQ6 578 aaPredicted RBP13.56□□□□□ -0.24
SNX29-207ENST00000568949 IL21Q9HBE4 155 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 DDX19AQ9NUU7 478 aaKnown RBP13.56□□□□□ -0.24
SNX29-207ENST00000568949 KCNG1Q9UIX4 513 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 UBQLN1Q9UMX0 589 aaKnown RBP13.56□□□□□ -0.24
SNX29-207ENST00000568949 NUP205Q92621 2012 aa13.56□□□□□ -0.24
SNX29-207ENST00000568949 ZNF638Q14966 1978 aaKnown RBP13.55□□□□□ -0.24
SNX29-207ENST00000568949 TTC26A0AVF1 554 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 BCLAF3A2AJT9 711 aaKnown RBP13.55□□□□□ -0.24
SNX29-207ENST00000568949 C4orf47A7E2U8 309 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 SLC16A4O15374 487 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 XPOTO43592 962 aaKnown RBP13.55□□□□□ -0.24
SNX29-207ENST00000568949 RNF40O75150 1001 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 CAVIN2O95810 425 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 NEFLP07196 543 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 CLTAP09496 248 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 CXCL8P10145 99 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 TUFMP49411 452 aaKnown RBP13.55□□□□□ -0.24
SNX29-207ENST00000568949 FOSBP53539 338 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 MCL1Q07820 350 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 ZNF252P-AS1Q0IIN9 211 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 FOXC1Q12948 553 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 PDIA5Q14554 519 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 VEPH1Q14D04 833 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 ACAP1Q15027 740 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 ME3Q16798 604 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 FBXO43Q4G163 708 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 SEZ6Q53EL9 994 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 TCEAL6Q6IPX3 200 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 TTC9BQ8N6N2 239 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 SPIRE2Q8WWL2 714 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 TCEAL3Q969E4 200 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 TSPAN18Q96SJ8 248 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 SLC46A2Q9BY10 475 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 ANKFY1Q9P2R3 1169 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 LRWD1Q9UFC0 647 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 EBF1Q9UH73 591 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
SNX29-207ENST00000568949 DENND4CQ5VZ89 1909 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 FRYQ5TBA9 3013 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 ABCA7Q8IZY2 2146 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 GIPC1O14908 333 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CLDN3O15551 220 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 JAK2O60674 1132 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 SOAT2O75908 522 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 LARGE1O95461 756 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CEACAM1P13688 526 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CSRP1P21291 193 aaKnown RBP13.54□□□□□ -0.24
SNX29-207ENST00000568949 DRD1P21728 446 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CYP4F8P98187 520 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CREB5Q02930 508 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 RINT1Q6NUQ1 792 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 C1orf186Q6ZWK4 172 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 SYT13Q7L8C5 426 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 C11orf74Q86VG3 221 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CMTM8Q8IZV2 173 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 EXOC4Q96A65 974 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 CHFRQ96EP1 664 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 KIF12Q96FN5 646 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 HHIPQ96QV1 700 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 LPIN3Q9BQK8 851 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 RUSC1Q9BVN2 902 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 TIPINQ9BVW5 301 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 ADAM33Q9BZ11 813 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 SMG9Q9H0W8 520 aaKnown RBP13.54□□□□□ -0.24
SNX29-207ENST00000568949 KIF9Q9HAQ2 790 aa13.54□□□□□ -0.24
SNX29-207ENST00000568949 PKD1L2Q7Z442 2459 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 MYH11P35749 1972 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 LNP1A1A4G5 178 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 OTOL1A6NHN0 477 aaPredicted RBP13.53□□□□□ -0.24
SNX29-207ENST00000568949 SOBPA7XYQ1 873 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 APBB3O95704 486 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 EGFP01133 1207 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 MAPTP10636 758 aaKnown RBP13.53□□□□□ -0.24
SNX29-207ENST00000568949 ODC1P11926 461 aa13.53□□□□□ -0.24
SNX29-207ENST00000568949 HOXB3P14651 431 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms