RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 SNRPFP62306 86 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 PRKCEQ02156 737 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 RBL2Q08999 1139 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 LRMPQ12912 555 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MAPK7Q13164 816 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TRIM14Q14142 442 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MYBPC2Q14324 1141 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 NFIL3Q16649 462 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MAN2A1Q16706 1144 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 NKPD1Q17RQ9 610 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ZCWPW2Q504Y3 356 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ZC2HC1CQ53FD0 456 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 IQSEC1Q6DN90 963 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ARMCX5Q6P1M9 558 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC62Q6P9F0 684 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MAMDC4Q6UXC1 1216 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ARMCX2Q7L311 632 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 PLPPR4Q7Z2D5 763 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 FRMD5Q7Z6J6 570 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 SPACA3Q8IXA5 215 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 DAW1Q8N136 415 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TAB3Q8N5C8 712 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MSL3Q8N5Y2 521 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 FAM169BQ8N8A8 192 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 SMC1BQ8NDV3 1235 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC112Q8NEF3 446 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 MCPH1Q8NEM0 835 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 GOLGA5Q8TBA6 731 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 NETO1Q8TDF5 533 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 AFAP1L1Q8TED9 768 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 GLG1Q92896 1179 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 VWCEQ96DN2 955 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 IQCDQ96DY2 449 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC51Q96ER9 411 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 IFT74Q96LB3 600 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 Q96M66 194 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 FGD4Q96M96 766 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 SPATA33Q96N06 139 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 PANX2Q96RD6 677 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 SH2D3AQ9BRG2 576 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 STRA6Q9BX79 667 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 FGFBP2Q9BYJ0 223 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TMX1Q9H3N1 280 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 NDST4Q9H3R1 872 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ST6GALNAC4Q9H4F1 302 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM206Q9H813 350 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 METTL14Q9HCE5 456 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 VTA1Q9NP79 307 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 RRAGDQ9NQL2 400 aaPredicted RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 PDLIM7Q9NR12 457 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CGNQ9P2M7 1197 aaKnown RBP6.71□□□□□ -1.34
CAPN3-218ENST00000568153 EXOC7Q9UPT5 735 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TELO2Q9Y4R8 837 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 CAPN6Q9Y6Q1 641 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 UBE4BO95155 1302 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 ITIH6Q6UXX5 1313 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 PASKQ96RG2 1323 aa6.71□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM150BA6NC51 233 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 H0YCG3 227 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 CLIC2O15247 247 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 SLC16A4O15374 487 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 TGFB1I1O43294 461 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 STX10O60499 249 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 TLR2O60603 784 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 ARIH2O95376 493 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 SNAI1O95863 264 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 GH1P01241 217 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 NR3C1P04150 777 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 SCP2P22307 547 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 NR2F2P24468 414 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 PSMC2P35998 433 aaKnown RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 TCF7P36402 384 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 SLC26A2P50443 739 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 ADKP55263 362 aaKnown RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 PEX3P56589 373 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 RTP1P59025 263 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 GTF2BQ00403 316 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 SREBF2Q12772 1141 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 GRB14Q14449 540 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 IFI16Q16666 785 aaKnown RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 PTPN21Q16825 1174 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 MTERF2Q49AM1 385 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 MIIPQ5JXC2 388 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 PLA2G4FQ68DD2 849 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 TAPT1Q6NXT6 567 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 C17orf99Q6UX52 265 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 LRRC55Q6ZSA7 311 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 HAUS6Q7Z4H7 955 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 CNGA4Q8IV77 575 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 CCDC60Q8IWA6 550 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 ZC3H3Q8IXZ2 948 aaKnown RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 TMEM192Q8IY95 271 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 MFSD4AQ8N468 514 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 ZNF397Q8NF99 534 aaPredicted RBP6.7□□□□□ -1.34
CAPN3-218ENST00000568153 OR8K1Q8NGG5 319 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 RNF141Q8WVD5 230 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 HHIPL1Q96JK4 782 aa6.7□□□□□ -1.34
CAPN3-218ENST00000568153 COX4I2Q96KJ9 171 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms