RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 FAM200AQ8TCP9 573 aa11.91□□□□□ -0.5
LINC01228-201ENST00000567966 HASPINQ8TF76 798 aa11.91□□□□□ -0.5
LINC01228-201ENST00000567966 C18orf25Q96B23 403 aaPredicted RBP11.91□□□□□ -0.5
LINC01228-201ENST00000567966 DUSP9Q99956 384 aaKnown RBP11.91□□□□□ -0.5
LINC01228-201ENST00000567966 KCNH6Q9H252 994 aa11.91□□□□□ -0.5
LINC01228-201ENST00000567966 ARMCX3Q9UH62 379 aaPredicted RBP11.91□□□□□ -0.5
LINC01228-201ENST00000567966 R3HCC1Q9Y3T6 440 aaKnown RBP11.91□□□□□ -0.5
LINC01228-201ENST00000567966 SF3B1O75533 1304 aaKnown RBP eCLIP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 MTCL1Q9Y4B5 1905 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 CCDC195A0A1B0GUA6 201 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 PODXLO00592 558 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 PMM2O15305 246 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 N4BP1O75113 896 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 RFPL2O75678 378 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 ADH1AP07327 375 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 NFICP08651 508 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 TMEM191BP0C7N4 346 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 CASP4P49662 377 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 CLCNKBP51801 687 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 VAMP7P51809 220 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 TFAMQ00059 246 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 STX1AQ16623 288 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 USP41Q3LFD5 358 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 DPCR1Q3MIW9 517 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 C9orf57Q5W0N0 161 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 SUGP1Q8IWZ8 645 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 ENOX1Q8TC92 643 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 RIN2Q8WYP3 895 aaPredicted RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 CCDC127Q96BQ5 260 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 CGRRF1Q99675 332 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 SRRTQ9BXP5 876 aaKnown RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 OXCT2Q9BYC2 517 aaPredicted RBP11.9□□□□□ -0.5
LINC01228-201ENST00000567966 SORCS3Q9UPU3 1222 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 TRIP11Q15643 1979 aa11.9□□□□□ -0.5
LINC01228-201ENST00000567966 SYN3O14994 580 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 KIF4AO95239 1232 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 STAU1O95793 577 aaKnown RBP11.89□□□□□ -0.51
LINC01228-201ENST00000567966 GLUD1P00367 558 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 DLATP10515 647 aaKnown RBP11.89□□□□□ -0.51
LINC01228-201ENST00000567966 AVPR2P30518 371 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 ATICP31939 592 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 AARSP49588 968 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01228-201ENST00000567966 LILRA4P59901 499 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 CREMQ03060 361 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 TCF15Q12870 199 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 BFSP1Q12934 665 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 MYO1EQ12965 1108 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 RTP2Q5QGT7 225 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 LILRA6Q6PI73 481 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 CD300LGQ6UXG3 332 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 CCDC149Q6ZUS6 474 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 TRAPPC11Q7Z392 1133 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 FAM114A1Q8IWE2 563 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 EFCAB13Q8IY85 973 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 C1orf127Q8N9H9 656 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 APPL2Q8NEU8 664 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 TAF4BQ92750 862 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 ZNF707Q96C28 371 aaPredicted RBP11.89□□□□□ -0.51
LINC01228-201ENST00000567966 FAXDC2Q96IV6 333 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 THAP9Q9H5L6 903 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.89□□□□□ -0.51
LINC01228-201ENST00000567966 TUBGCP4Q9UGJ1 667 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 DSEQ9UL01 958 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 CTNND2Q9UQB3 1225 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 USTQ9Y2C2 406 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 NUB1Q9Y5A7 615 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 VWA8A3KMH1 1905 aa11.89□□□□□ -0.51
LINC01228-201ENST00000567966 TRIM49BA6NDI0 452 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 M0QZQ0 153 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 ADAM12O43184 909 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 TGM5O43548 720 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 C4BPAP04003 597 aaKnown RBP11.88□□□□□ -0.51
LINC01228-201ENST00000567966 FGFR3P22607 806 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 WNT7BP56706 349 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 SPAG1Q07617 926 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 MTMR3Q13615 1198 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 TPD52L1Q16890 204 aaPredicted RBP11.88□□□□□ -0.51
LINC01228-201ENST00000567966 ZACNQ401N2 412 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 SV2CQ496J9 727 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.88□□□□□ -0.51
LINC01228-201ENST00000567966 C15orf39Q6ZRI6 1047 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 DPH6Q7L8W6 267 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 CMASQ8NFW8 434 aaPredicted RBP11.88□□□□□ -0.51
LINC01228-201ENST00000567966 CXorf38Q8TB03 319 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 SPATA18Q8TC71 538 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 ZNF516Q92618 1163 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 SUSD3Q96L08 255 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 ZNF560Q96MR9 790 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 MED15Q96RN5 788 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 TTPALQ9BTX7 342 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 VRTNQ9H8Y1 702 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 GDAP2Q9NXN4 497 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 FNIP2Q9P278 1114 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 BOLA1Q9Y3E2 137 aa11.88□□□□□ -0.51
LINC01228-201ENST00000567966 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
LINC01228-201ENST00000567966 KPNA7A9QM74 516 aa11.87□□□□□ -0.51
LINC01228-201ENST00000567966 P4HA2O15460 535 aa11.87□□□□□ -0.51
LINC01228-201ENST00000567966 PHACTR2O75167 634 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms