RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 KBTBD7Q8WVZ9 684 aa18.48■□□□□ 0.55
COMMD4-220ENST00000567720 SYAP1Q96A49 352 aaPredicted RBP18.48■□□□□ 0.55
COMMD4-220ENST00000567720 ASB2Q96Q27 587 aa18.48■□□□□ 0.55
COMMD4-220ENST00000567720 S1PR5Q9H228 398 aa18.48■□□□□ 0.55
COMMD4-220ENST00000567720 DACH1Q9UI36 760 aa18.48■□□□□ 0.55
COMMD4-220ENST00000567720 POLIQ9UNA4 740 aa18.48■□□□□ 0.55
COMMD4-220ENST00000567720 TTC28Q96AY4 2481 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 GREB1Q4ZG55 1949 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 PATJQ8NI35 1801 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 NCOR1O75376 2440 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 OR6C75A6NL08 312 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 HUS1O60921 280 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 ABLIM3O94929 683 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 VNN2O95498 520 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 ASS1P00966 412 aaKnown RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 IL9P15248 144 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 HOXB8P17481 243 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 ATICP31939 592 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 GTF2H1P32780 548 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 MARSP56192 900 aaKnown RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 AAK1Q2M2I8 961 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 SPOPLQ6IQ16 392 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 PTCRAQ6ISU1 281 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 SCARA5Q6ZMJ2 495 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 C11orf57Q6ZUT1 292 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 METTL23Q86XA0 190 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 TMEM86AQ8N2M4 240 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 SRRTQ9BXP5 876 aaKnown RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 PLEKHA4Q9H4M7 779 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 SMYD3Q9H7B4 428 aa18.47■□□□□ 0.55
COMMD4-220ENST00000567720 METTL14Q9HCE5 456 aaKnown RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 USP15Q9Y4E8 981 aaPredicted RBP18.47■□□□□ 0.55
COMMD4-220ENST00000567720 SPDYE4A6NLX3 237 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 LRRN2O75325 713 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 CLSTN1O94985 981 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 C8AP07357 584 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 ERCC5P28715 1186 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 TNNC1P63316 161 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 STX1AQ16623 288 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 CCDC142Q17RM4 750 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 WDR72Q3MJ13 1102 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 LIN9Q5TKA1 542 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 KRT39Q6A163 491 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 TMC5Q6UXY8 1006 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 RNF19BQ6ZMZ0 732 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 TRIM59Q8IWR1 403 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 ZNF461Q8TAF7 563 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 SLC7A14Q8TBB6 771 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 SPATA18Q8TC71 538 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 HDAC7Q8WUI4 952 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 SUSD6Q92537 303 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 CNOT6LQ96LI5 555 aaKnown RBP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 PI4K2AQ9BTU6 479 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 OXCT2Q9BYC2 517 aaPredicted RBP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 ZCWPW1Q9H0M4 648 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 DDX43Q9NXZ2 648 aaKnown RBP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 NXF1Q9UBU9 619 aaKnown RBP18.46■□□□□ 0.55
COMMD4-220ENST00000567720 NME7Q9Y5B8 376 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 MYH10P35580 1976 aa18.46■□□□□ 0.55
COMMD4-220ENST00000567720 DENND4CQ5VZ89 1909 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 BDP1A6H8Y1 2624 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 GABRDO14764 452 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 STX10O60499 249 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 PAPLNO95428 1278 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 WEE2P0C1S8 567 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 ACAT1P24752 427 aaKnown RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 RAP1GAPP47736 663 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 NOP14P78316 857 aaKnown RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 ZNF667Q5HYK9 610 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 TPGS2Q68CL5 300 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 DPH6Q7L8W6 267 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 IRF2BP1Q8IU81 584 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 CMASQ8NFW8 434 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 SEMA4DQ92854 862 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 ZNF707Q96C28 371 aaPredicted RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 PGLYRP2Q96PD5 576 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 MMS19Q96T76 1030 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 MRPL45Q9BRJ2 306 aaKnown RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 CRISPLD1Q9H336 500 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 APOBEC3GQ9HC16 384 aaKnown RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 AFF4Q9UHB7 1163 aaKnown RBP18.45■□□□□ 0.54
COMMD4-220ENST00000567720 DPP7Q9UHL4 492 aa18.45■□□□□ 0.54
COMMD4-220ENST00000567720 MTMR11A4FU01 709 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 ZMYND10O75800 440 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 SEC24AO95486 1093 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 GNA14O95837 355 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 BMP1P13497 986 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 ATF2P15336 505 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 PTMSP20962 102 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 WARSP23381 471 aaKnown RBP18.44■□□□□ 0.54
COMMD4-220ENST00000567720 ASPAP45381 313 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 MYL7Q01449 175 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 ITIH3Q06033 890 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 GPR17Q13304 367 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 SMAD2Q15796 467 aaKnown RBP18.44■□□□□ 0.54
COMMD4-220ENST00000567720 SLC39A12Q504Y0 691 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 TJAP1Q5JTD0 557 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 ELMSAN1Q6PJG2 1045 aa18.44■□□□□ 0.54
COMMD4-220ENST00000567720 SASS6Q6UVJ0 657 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms