RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 ITGALP20701 1170 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 PHKA1P46020 1223 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 ZNF135P52742 658 aaPredicted RBP4.37□□□□□ -1.71
CDH1-211ENST00000567320 EIF2B5Q13144 721 aaKnown RBP4.37□□□□□ -1.71
CDH1-211ENST00000567320 ABCB5Q2M3G0 1257 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 ZNF425Q6IV72 752 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 ZNF782Q6ZMW2 699 aaPredicted RBP4.37□□□□□ -1.71
CDH1-211ENST00000567320 C1QL2Q7Z5L3 287 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 PNMA8AQ86V59 439 aaPredicted RBP4.37□□□□□ -1.71
CDH1-211ENST00000567320 SCAMP4Q969E2 229 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 MRGPRX4Q96LA9 322 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 VKORC1Q9BQB6 163 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 SMOC2Q9H3U7 446 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 CFAP97Q9P2B7 532 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 IPPQ9Y573 584 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 PCDHB1Q9Y5F3 818 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 PHLDB1Q86UU1 1377 aa4.37□□□□□ -1.71
CDH1-211ENST00000567320 TARM1B6A8C7 271 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 PROB1E7EW31 1015 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 SMIM22K7EJ46 135 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 IKBKBO14920 756 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 BMP15O95972 392 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 GJB1P08034 283 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 FAM163BP0C2L3 166 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 MALP21145 153 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 DRD4P21917 467 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 KELP23276 732 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 CD6P30203 668 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 RBM20Q5T481 1227 aaKnown RBP4.36□□□□□ -1.71
CDH1-211ENST00000567320 ZNF626Q68DY1 528 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 SLC4A10Q6U841 1118 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 TTC7BQ86TV6 843 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 FANCBQ8NB91 859 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 PSD4Q8NDX1 1056 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 SEMA6DQ8NFY4 1073 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 POC1BQ8TC44 478 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 CNPPD1Q9BV87 410 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 FLRT1Q9NZU1 646 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 DKK3Q9UBP4 350 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 PRKAB1Q9Y478 270 aa4.36□□□□□ -1.71
CDH1-211ENST00000567320 SETD1BQ9UPS6 1966 aaKnown RBP4.35□□□□□ -1.71
CDH1-211ENST00000567320 WDR27A2RRH5 827 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 F2RL2O00254 374 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 EDNRBP24530 442 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 CTGFP29279 349 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 MPGP29372 298 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 CYP2C19P33261 490 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ALDH9A1P49189 494 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ITKQ08881 620 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 BMPR2Q13873 1038 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 TAF2Q6P1X5 1199 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 CEP85Q6P2H3 762 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 SLC29A4Q7RTT9 530 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ZNF551Q7Z340 670 aaPredicted RBP4.35□□□□□ -1.71
CDH1-211ENST00000567320 DDX42Q86XP3 938 aaKnown RBP eCLIP4.35□□□□□ -1.71
CDH1-211ENST00000567320 PDSS2Q86YH6 399 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ATRIPQ8WXE1 791 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 RFKQ969G6 155 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 COA7Q96BR5 231 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 FAM136AQ96C01 138 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 AMBRA1Q9C0C7 1298 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 SIK2Q9H0K1 926 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ARHGEF3Q9NR81 526 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 RAD54BQ9Y620 910 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 ZNF804BA4D1E1 1349 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 SPATA31A3Q5VYP0 1347 aa4.35□□□□□ -1.71
CDH1-211ENST00000567320 QSOX1O00391 747 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 NXPH3O95157 252 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 KIF20AO95235 890 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 CHEK2O96017 543 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 CYP2D6P10635 497 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 PTGER1P34995 402 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 SNAPC2Q13487 334 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 HABP2Q14520 560 aaPredicted RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 ETFDHQ16134 617 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 SYDE2Q5VT97 1194 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 EFCAB2Q5VUJ9 269 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 TMPRSS9Q7Z410 1059 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 NECAB2Q7Z6G3 386 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 YTHDF3Q7Z739 585 aaKnown RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 CBARPQ8N350 705 aaPredicted RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 TNPO1Q92973 898 aaKnown RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 MTMR8Q96EF0 704 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 TEKT5Q96M29 485 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 OSBPL9Q96SU4 736 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 SH2D3AQ9BRG2 576 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 SIDT1Q9NXL6 827 aaKnown RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 TRHDEQ9UKU6 1024 aa4.34□□□□□ -1.71
CDH1-211ENST00000567320 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDH1-211ENST00000567320 CFAP20Q9Y6A4 193 aaKnown RBP4.34□□□□□ -1.71
CDH1-211ENST00000567320 ZNF521Q96K83 1311 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 LRRC14BA6NHZ5 514 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PPM1DO15297 605 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PCDHGA12O60330 932 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 SOAT2O75908 522 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 JTBO76095 146 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 GNAI2P04899 355 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 PDHA1P08559 390 aa4.33□□□□□ -1.72
CDH1-211ENST00000567320 LPOP22079 712 aaPredicted RBP4.33□□□□□ -1.72
CDH1-211ENST00000567320 CCND1P24385 295 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms