RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 PRAMEF19Q5SWL8 479 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 JADE1Q6IE81 842 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 SND1Q7KZF4 910 aaKnown RBP eCLIP24.7■■□□□ 1.55
LINC00543-201ENST00000567234 TLK2Q86UE8 772 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 CASKIN2Q8WXE0 1202 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 SOCS4Q8WXH5 440 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 BTBD6Q96KE9 485 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 PPP1R16BQ96T49 567 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 FAM124BQ9H5Z6 455 aaPredicted RBP24.7■■□□□ 1.55
LINC00543-201ENST00000567234 SLTMQ9NWH9 1034 aaKnown RBP eCLIP24.7■■□□□ 1.55
LINC00543-201ENST00000567234 GJD2Q9UKL4 321 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 C2CD2Q9Y426 696 aa24.7■■□□□ 1.55
LINC00543-201ENST00000567234 RALGAPA2Q2PPJ7 1873 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 CFHP08603 1231 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 SMIM10L2AP0DMW4 78 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 SMIM10L2BP0DMW5 78 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 CYP2B6P20813 491 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 CDH5P33151 784 aaPredicted RBP24.7■■□□□ 1.54
LINC00543-201ENST00000567234 ZNF211Q13398 564 aaPredicted RBP24.7■■□□□ 1.54
LINC00543-201ENST00000567234 TAX1BP1Q86VP1 789 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 WHAMMQ8TF30 809 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 ACAP3Q96P50 834 aa24.7■■□□□ 1.54
LINC00543-201ENST00000567234 GCOM2Q9BZD3 368 aaPredicted RBP24.7■■□□□ 1.54
LINC00543-201ENST00000567234 CHUKO15111 745 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 MEFVO15553 781 aaPredicted RBP24.69■■□□□ 1.54
LINC00543-201ENST00000567234 IGHA2P01877 340 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 CD58P19256 250 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 MMP8P22894 467 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 GRM5P41594 1212 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 MARCKSL1P49006 195 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 FNTAP49354 379 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 CPT1AP50416 773 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 GNGT1P63211 74 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 PASD1Q8IV76 773 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 CXorf38Q8TB03 319 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 SEC14L1Q92503 715 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 C11orf70Q9BRQ4 267 aa24.69■■□□□ 1.54
LINC00543-201ENST00000567234 CALB1P05937 261 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 EIF4BP23588 611 aaKnown RBP24.68■■□□□ 1.54
LINC00543-201ENST00000567234 LACTBP83111 547 aaPredicted RBP24.68■■□□□ 1.54
LINC00543-201ENST00000567234 CCDC50Q8IVM0 306 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 TMEM35BQ8NCS4 154 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 APBA2Q99767 749 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 CYP3A43Q9HB55 503 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 PARVAQ9NVD7 372 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 RNF186Q9NXI6 227 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 NFU1Q9UMS0 254 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 ZSCAN5CA6NGD5 496 aaPredicted RBP24.68■■□□□ 1.54
LINC00543-201ENST00000567234 HAS3O00219 553 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 PROSCO94903 275 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 STAU1O95793 577 aaKnown RBP24.68■■□□□ 1.54
LINC00543-201ENST00000567234 KRT19P08727 400 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 PAEPP09466 180 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 WEE2P0C1S8 567 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 P4HA1P13674 534 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 PSMC4P43686 418 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 MAMLD1Q13495 774 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 MFSD10Q14728 455 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 TMEM132DQ14C87 1099 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 MREGQ8N565 214 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 IFT81Q8WYA0 676 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 RUFY1Q96T51 708 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 AMACRQ9UHK6 382 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 ITGA11Q9UKX5 1188 aa24.68■■□□□ 1.54
LINC00543-201ENST00000567234 HSF2BPO75031 334 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 GPR32O75388 356 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 PYGMP11217 842 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 DHX34Q14147 1143 aaKnown RBP24.67■■□□□ 1.54
LINC00543-201ENST00000567234 KDM7AQ6ZMT4 941 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 REM2Q8IYK8 340 aaPredicted RBP24.67■■□□□ 1.54
LINC00543-201ENST00000567234 OTUD6BQ8N6M0 293 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 MAGEC3Q8TD91 643 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 PLEKHA5Q9HAU0 1116 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 SBDSQ9Y3A5 250 aaKnown RBP eCLIP24.67■■□□□ 1.54
LINC00543-201ENST00000567234 CENPFP49454 3210 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 THSD7BQ9C0I4 1608 aa24.67■■□□□ 1.54
LINC00543-201ENST00000567234 ESYT3A0FGR9 886 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 FAM187AA6NFU0 413 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 MED7O43513 233 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 ITGB3P05106 788 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 CHRNA3P32297 505 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 MAN1A1P33908 653 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 ADAM17P78536 824 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 WDR72Q3MJ13 1102 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 GDAP1L1Q96MZ0 367 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 RUNDC3BQ96NL0 473 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 AP5M1Q9H0R1 490 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 RAB17Q9H0T7 212 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 NXF1Q9UBU9 619 aaKnown RBP24.66■■□□□ 1.54
LINC00543-201ENST00000567234 GABRQQ9UN88 632 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 DERAQ9Y315 318 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 NR2E1Q9Y466 385 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 TRIP11Q15643 1979 aa24.66■■□□□ 1.54
LINC00543-201ENST00000567234 PHF2O75151 1096 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 BRD2P25440 801 aaKnown RBP24.65■■□□□ 1.54
LINC00543-201ENST00000567234 PSEN2P49810 448 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 KIZQ2M2Z5 673 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 SCARA5Q6ZMJ2 495 aa24.65■■□□□ 1.54
LINC00543-201ENST00000567234 SLC13A5Q86YT5 568 aaPredicted RBP24.65■■□□□ 1.54
LINC00543-201ENST00000567234 TTC39CQ8N584 583 aa24.65■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms