RNA–Protein interactions for RNA: ENST00000566926.1

CLK3-218, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-218ENST00000566926 CBWD2Q8IUF1 395 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 WDR49Q8IV35 697 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 FAM114A1Q8IWE2 563 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 SMYD4Q8IYR2 804 aaPredicted RBP14.45□□□□□ -0.1
CLK3-218ENST00000566926 ZDHHC14Q8IZN3 488 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 THEM5Q8N1Q8 247 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CSGALNACT2Q8N6G5 542 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 LRRC52Q8N7C0 313 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 RDH13Q8NBN7 331 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 SLC7A14Q8TBB6 771 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 TMEM174Q8WUU8 243 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 ZNF707Q96C28 371 aaPredicted RBP14.45□□□□□ -0.1
CLK3-218ENST00000566926 INTS13Q9NVM9 706 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 AFF4Q9UHB7 1163 aaKnown RBP14.45□□□□□ -0.1
CLK3-218ENST00000566926 CDH22Q9UJ99 828 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 AGAP1Q9UPQ3 857 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CTNND2Q9UQB3 1225 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 NFE2L3Q9Y4A8 694 aa14.45□□□□□ -0.1
CLK3-218ENST00000566926 CLUHO75153 1309 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 MUC3AQ02505 3323 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 WDR27A2RRH5 827 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 C2CD4DB7Z1M9 353 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 CYB561D2O14569 222 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 PRRG1O14668 218 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 LRG1P02750 347 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 ITGB3P05106 788 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 KRT19P08727 400 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 TNNI1P19237 187 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 POLR2BP30876 1174 aaKnown RBP14.44□□□□□ -0.1
CLK3-218ENST00000566926 CCDC173Q0VFZ6 552 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 MYO1EQ12965 1108 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 PSMD6Q15008 389 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 SLC9A9Q8IVB4 645 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 TCEAL8Q8IYN2 117 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 C1orf127Q8N9H9 656 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 THAP9Q9H5L6 903 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 EPHX3Q9H6B9 360 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 CYP4F11Q9HBI6 524 aa14.44□□□□□ -0.1
CLK3-218ENST00000566926 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.44□□□□□ -0.1
CLK3-218ENST00000566926 TIMM13Q9Y5L4 95 aaPredicted RBP14.44□□□□□ -0.1
CLK3-218ENST00000566926 NOTCH4Q99466 2003 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 SPTLC1O15269 473 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 CBFA2T2O43439 604 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 HUS1O60921 280 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 PRKCSHP14314 528 aaPredicted RBP14.43□□□□□ -0.1
CLK3-218ENST00000566926 ZNF18P17022 549 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 SP100P23497 879 aaPredicted RBP14.43□□□□□ -0.1
CLK3-218ENST00000566926 WNT7BP56706 349 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 CYP24A1Q07973 514 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 SMARCB1Q12824 385 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 GPR17Q13304 367 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 EDRF1Q3B7T1 1238 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 ELMOD1Q8N336 334 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 TMEM130Q8N3G9 435 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 KHSRPQ92945 711 aaKnown RBP eCLIP14.43□□□□□ -0.1
CLK3-218ENST00000566926 MTMR12Q9C0I1 747 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 KCTD10Q9H3F6 313 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 MUTYHQ9UIF7 546 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 POLIQ9UNA4 740 aa14.43□□□□□ -0.1
CLK3-218ENST00000566926 ZFP37Q9Y6Q3 630 aaPredicted RBP14.43□□□□□ -0.1
CLK3-218ENST00000566926 CCL16O15467 120 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 GPR37L1O60883 481 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 DLATP10515 647 aaKnown RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 CDK11BP21127 795 aaKnown RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 RPL13P26373 211 aaKnown RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 EEF1GP26641 437 aaKnown RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 GBP2P32456 591 aaPredicted RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 DEKP35659 375 aaKnown RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 AP3M2P53677 418 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 ADCY1Q08828 1119 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 BFSP1Q12934 665 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 PLD1Q13393 1074 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 PTPN21Q16825 1174 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 TMEM31Q5JXX7 168 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 TTI2Q6NXR4 508 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 TMEM86AQ8N2M4 240 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 SPATA18Q8TC71 538 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 BORCS6Q96GS4 357 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 MRFAP1L1Q96HT8 127 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 MFSD14AQ96MC6 490 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 CGRRF1Q99675 332 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 FANCLQ9NW38 375 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 DMAC2Q9NW81 257 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 GDAP2Q9NXN4 497 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 MAGEC2Q9UBF1 373 aaPredicted RBP14.42□□□□□ -0.1
CLK3-218ENST00000566926 MAPK8IP1Q9UQF2 711 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 TRAF3IP3Q9Y228 551 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 FRMD4BQ9Y2L6 1034 aa14.42□□□□□ -0.1
CLK3-218ENST00000566926 GNA14O95837 355 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 NR3C1P04150 777 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 TPM2P07951 284 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 PTPN2P17706 415 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 FSHRP23945 695 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 FKBP3Q00688 224 aaKnown RBP14.41□□□□□ -0.1
CLK3-218ENST00000566926 NFIL3Q16649 462 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 CDKAL1Q5VV42 579 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 IQCEQ6IPM2 695 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 RNF19BQ6ZMZ0 732 aa14.41□□□□□ -0.1
CLK3-218ENST00000566926 DPH6Q7L8W6 267 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms