RNA–Protein interactions for RNA: ENST00000566779.1

GTF3C1-206, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-206ENST00000566779 PDZD4Q76G19 769 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 BRSK2Q8IWQ3 736 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 NPAS3Q8IXF0 933 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 GPD1LQ8N335 351 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 RDH13Q8NBN7 331 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 MTMR12Q9C0I1 747 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 ASB7Q9H672 318 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 TMEM206Q9H813 350 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 PDE11AQ9HCR9 933 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC39A2Q9NP94 309 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 FAM86C1Q9NVL1 165 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 KBTBD4Q9NVX7 518 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 EPS15L1Q9UBC2 864 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 AFF4Q9UHB7 1163 aaKnown RBP10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 KCNH3Q9ULD8 1083 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 DUSP12Q9UNI6 340 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 AGAP1Q9UPQ3 857 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC27A5Q9Y2P5 690 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 DERAQ9Y315 318 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 C2CD2Q9Y426 696 aa10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.92□□□□□ -0.66
GTF3C1-206ENST00000566779 A0A1B0GVL5 298 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 OR6C75A6NL08 312 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 CLIC2O15247 247 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 EXTL3O43909 919 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 ABLIM3O94929 683 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 C1RP00736 705 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 TNNC2P02585 160 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 PDIA4P13667 645 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 ATF2P15336 505 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 PFKFB1P16118 471 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 PTPN2P17706 415 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 GARTP22102 1010 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 DUSP4Q13115 394 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 CUL4BQ13620 913 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 QPCTQ16769 361 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 UVSSAQ2YD98 709 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC39A12Q504Y0 691 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 CYP4A22Q5TCH4 519 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 WSCD1Q658N2 575 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 TPGS2Q68CL5 300 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 CBWD2Q8IUF1 395 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 SLC44A3Q8N4M1 653 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 TTC9BQ8N6N2 239 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 ATAD1Q8NBU5 361 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 PRSS33Q8NF86 280 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 OR10T2Q8NGX3 314 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 GPR152Q8TDT2 470 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 FGF14Q92915 247 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 KCNN1Q92952 543 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 TCEAL4Q96EI5 215 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 ZNF512Q96ME7 567 aaPredicted RBP10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 RPP25Q9BUL9 199 aaKnown RBP10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 STRA6Q9BX79 667 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 RHOBTB2Q9BYZ6 727 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 MAGEF1Q9HAY2 307 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 GDPD2Q9HCC8 539 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 ASAH2Q9NR71 780 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 EXOC1Q9NV70 894 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 STYXL1Q9Y6J8 313 aa10.91□□□□□ -0.66
GTF3C1-206ENST00000566779 PTPRDP23468 1912 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 ARHGEF37A1IGU5 675 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 MTMR11A4FU01 709 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 PIRO00625 290 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 TBC1D4O60343 1298 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 LDHAP00338 332 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 DLATP10515 647 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 SRFP11831 508 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 TYMPP19971 482 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 ACAT1P24752 427 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 AVPR2P30518 371 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 EPHB3P54753 998 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 MRPL58Q14197 206 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 GRM2Q14416 872 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 BECN1Q14457 450 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 MGAT5BQ3V5L5 792 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 ATL3Q6DD88 541 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 UNC13DQ70J99 1090 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 MTSS1LQ765P7 747 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 BMP8AQ7Z5Y6 402 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 TCEAL8Q8IYN2 117 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 THEM5Q8N1Q8 247 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 CSGALNACT2Q8N6G5 542 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 TMEM105Q8N8V8 129 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 CACTINQ8WUQ7 758 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 LEO1Q8WVC0 666 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 CCDC127Q96BQ5 260 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 ANKRD36BP1Q96IX9 119 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 TSPAN18Q96SJ8 248 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 C7orf25Q9BPX7 421 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 ABI2Q9NYB9 513 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 HSPBP1Q9NZL4 362 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 CEP72Q9P209 647 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 KIAA1468Q9P260 1216 aa10.9□□□□□ -0.66
GTF3C1-206ENST00000566779 MYO16Q9Y6X6 1858 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 PTPRJQ12913 1337 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 ZNF233A6NK53 670 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 KPNA7A9QM74 516 aa10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 EIF3DO15371 548 aaKnown RBP eCLIP10.89□□□□□ -0.67
GTF3C1-206ENST00000566779 OAZ2O95190 189 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms