RNA–Protein interactions for RNA: ENST00000566121.1

CMTM3-212, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-212ENST00000566121 SV2CQ496J9 727 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 ASCL5Q7RTU5 278 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 LIMS2Q7Z4I7 341 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 METTL23Q86XA0 190 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 EFCAB13Q8IY85 973 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 CXorf38Q8TB03 319 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 SPPL2BQ8TCT7 592 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 ING5Q8WYH8 240 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 NELL1Q92832 810 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 ZNF560Q96MR9 790 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 KXD1Q9BQD3 176 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 CRISPLD1Q9H336 500 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 KIAA1586Q9HCI6 787 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 PANK4Q9NVE7 773 aa16.39■□□□□ 0.21
CMTM3-212ENST00000566121 SCN1AP35498 2009 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 SHISA7A6NL88 538 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 TISP43B9A030 160 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 EIF3DO15371 548 aaKnown RBP eCLIP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 CUTAO60888 179 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 GCNT3O95395 438 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 KCNA1Q09470 495 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 FZD5Q13467 585 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 STK38Q15208 465 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 SURF1Q15526 300 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ZC3H14Q6PJT7 736 aaKnown RBP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 DPH6Q7L8W6 267 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 FRMD5Q7Z6J6 570 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 DNAJB7Q7Z6W7 309 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 DCP1BQ8IZD4 617 aaKnown RBP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 HS6ST3Q8IZP7 471 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 TMEM86AQ8N2M4 240 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 IQUBQ8NA54 791 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ATAD1Q8NBU5 361 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 OR10T2Q8NGX3 314 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 SHKBP1Q8TBC3 707 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 TMEM174Q8WUU8 243 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 LEO1Q8WVC0 666 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 FAM212AQ96EL1 285 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ZSWIM3Q96MP5 696 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ACBD6Q9BR61 282 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 TRIM9Q9C026 710 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ZNF334Q9HCZ1 680 aaPredicted RBP16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ITGA11Q9UKX5 1188 aa16.38■□□□□ 0.21
CMTM3-212ENST00000566121 ANK1P16157 1881 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 GPR179Q6PRD1 2367 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 FAM170BA6NMN3 283 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 ARNTLO00327 626 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 CHADO15335 359 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 DCNP07585 359 aaKnown RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 CEBPZQ03701 1054 aaKnown RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 EHHADHQ08426 723 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 NFE2Q16621 373 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 EPM2AIP1Q7L775 607 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 MAML2Q8IZL2 1156 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 ZSCAN18Q8TBC5 510 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 ZNF507Q8TCN5 953 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 KCNG4Q8TDN1 519 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 CEP295NLQ96MC4 621 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 C7orf25Q9BPX7 421 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 PYM1Q9BRP8 204 aaKnown RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 FAM126AQ9BYI3 521 aaPredicted RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 FOXQ1Q9C009 403 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 ABCB6Q9NP58 842 aa16.37■□□□□ 0.21
CMTM3-212ENST00000566121 CGNQ9P2M7 1197 aaKnown RBP16.37■□□□□ 0.21
CMTM3-212ENST00000566121 FANCMQ8IYD8 2048 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 SP9P0CG40 484 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 IDEP14735 1019 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 CASP5P51878 434 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 VITQ6UXI7 678 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 GAREM2Q75VX8 874 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 SYCP3Q8IZU3 236 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 TMEM130Q8N3G9 435 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 C1orf127Q8N9H9 656 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 FAM213AQ9BRX8 229 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 MKNK1Q9BUB5 465 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 BRD9Q9H8M2 597 aa16.36■□□□□ 0.21
CMTM3-212ENST00000566121 RBAKQ9NYW8 714 aaPredicted RBP16.36■□□□□ 0.21
CMTM3-212ENST00000566121 NRG2O14511 850 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-212ENST00000566121 GABRDO14764 452 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 LMNAP02545 664 aaKnown RBP16.35■□□□□ 0.21
CMTM3-212ENST00000566121 OR4Q2P0C623 313 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 HAPLN1P10915 354 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-212ENST00000566121 MYL4P12829 197 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 DDX6P26196 483 aaKnown RBP eCLIP16.35■□□□□ 0.21
CMTM3-212ENST00000566121 CDC25CP30307 473 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 LHX1P48742 406 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 RBP5P82980 135 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 TEAD2Q15562 447 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 WSCD1Q658N2 575 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 LRRTM3Q86VH5 581 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 GPD1LQ8N335 351 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 TOP6BLQ8N6T0 577 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 PGLYRP2Q96PD5 576 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 PANK2Q9BZ23 570 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 TASP1Q9H6P5 420 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 C8orf33Q9H7E9 229 aaPredicted RBP16.35■□□□□ 0.21
CMTM3-212ENST00000566121 PCDHGA2Q9Y5H1 932 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 UBE4BO95155 1302 aa16.35■□□□□ 0.21
CMTM3-212ENST00000566121 PVALEFA0A1B0GWK0 134 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms