RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TDRD15B5MCY1 1934 aaKnown RBP20.39■□□□□ 0.86
CSPG4P13-201ENST00000565545 PAX3P23760 479 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 RPL9P32969 192 aaKnown RBP20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 PDE6CP51160 858 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 LINC01599Q8WXQ3 324 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 ELMO3Q96BJ8 720 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 FAM122AQ96E09 287 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 ZFP42Q96MM3 310 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 TMEM161AQ9NX61 479 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 NXF1Q9UBU9 619 aaKnown RBP20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 ADAMTS1Q9UHI8 967 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 REXO2Q9Y3B8 237 aaKnown RBP20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 GBF1Q92538 1859 aa20.39■□□□□ 0.85
CSPG4P13-201ENST00000565545 SCN1AP35498 2009 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 USP27XA6NNY8 438 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 MEIS3P2A8K0S8 358 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 KIF2AO00139 706 aaPredicted RBP20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 ENPP3O14638 875 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 ARHGEF15O94989 841 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 CYP11B1P15538 503 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 MAGEA1P43355 309 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 VAV2P52735 878 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 ZNF132P52740 706 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 GFPT1Q06210 699 aaPredicted RBP20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 GRIK3Q13003 919 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 SV2CQ496J9 727 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 TMEM270Q6UE05 265 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 KIAA1328Q86T90 577 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 GPIHBP1Q8IV16 184 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 RNF169Q8NCN4 708 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 SLC30A5Q8TAD4 765 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 EPS8L1Q8TE68 723 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 RSPH1Q8WYR4 309 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 HLA-CQ95604 372 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 TSGA10Q9BZW7 698 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 CISHQ9NSE2 258 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 NOCTQ9UK39 431 aaKnown RBP20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 PCDHA13Q9Y5I0 950 aa20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 PRRC2BQ5JSZ5 2229 aaKnown RBP20.38■□□□□ 0.85
CSPG4P13-201ENST00000565545 A0A087X0T9 212 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 ZNF263O14978 683 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 FAM163BP0C2L3 166 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 FAM228BP0C875 321 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 TAF6P49848 677 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 CDR2Q01850 454 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 SOX4Q06945 474 aaPredicted RBP20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 NAB2Q15742 525 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 GLB1LQ6UWU2 654 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 SLC47A2Q86VL8 602 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 RBBP8NLQ8NC74 664 aaPredicted RBP20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 DDX27Q96GQ7 796 aaKnown RBP20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 UROC1Q96N76 676 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 MIOSQ9NXC5 875 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 GDAP2Q9NXN4 497 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 KANSL3Q9P2N6 904 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 NAGPAQ9UK23 515 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 NENFQ9UMX5 172 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 POLIQ9UNA4 740 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 MUC3AQ02505 3323 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 SCN5AQ14524 2016 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 CHD7Q9P2D1 2997 aa20.37■□□□□ 0.85
CSPG4P13-201ENST00000565545 BDP1A6H8Y1 2624 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 DDX3XO00571 662 aaKnown RBP eCLIP20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 WEE2P0C1S8 567 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 SCNN1GP51170 649 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 CYP27A1Q02318 531 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 ARHGAP29Q52LW3 1261 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 ALKBH5Q6P6C2 394 aaKnown RBP20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 NOP9Q86U38 636 aaKnown RBP20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 URGCPQ8TCY9 931 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 INTUQ9ULD6 942 aa20.36■□□□□ 0.85
CSPG4P13-201ENST00000565545 KPNA7A9QM74 516 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 PJA2O43164 708 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 HOXA2O43364 376 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 KRT86O43790 486 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 PAEPP09466 180 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 GZMAP12544 262 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 PLA2G5P39877 138 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 WDR5P61964 334 aaKnown RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 INCA1Q0VD86 236 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 KIF5AQ12840 1032 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 PTPN14Q15678 1187 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 CCDC122Q5T0U0 273 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 CNKSR3Q6P9H4 555 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 SCARA5Q6ZMJ2 495 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 NYAP1Q6ZVC0 841 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 DPH6Q7L8W6 267 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 TMCO2Q7Z6W1 182 aaPredicted RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 LNX1Q8TBB1 728 aaPredicted RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 DDX1Q92499 740 aaKnown RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 DNAI2Q9GZS0 605 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 BARX2Q9UMQ3 279 aaPredicted RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 PCDHB7Q9Y5E2 793 aa20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 TCF20Q9UGU0 1960 aaKnown RBP20.35■□□□□ 0.85
CSPG4P13-201ENST00000565545 LCHNA4D1U4 455 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 PPEF2O14830 753 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 CHRNB2P17787 502 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 CD58P19256 250 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 GNA15P30679 374 aa20.34■□□□□ 0.85
CSPG4P13-201ENST00000565545 TUSC3Q13454 348 aa20.34■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms