RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SNX9Q9Y5X1 595 aa16.59■□□□□ 0.25
COMMD4-212ENST00000565517 IKBKBO14920 756 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 STAU1O95793 577 aaKnown RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 CST3P01034 146 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 FAM163BP0C2L3 166 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 OR4Q2P0C623 313 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 SP100P23497 879 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 ATICP31939 592 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 PPP1R2P41236 205 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 MCCD1P59942 119 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 ADAM9Q13443 819 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 GRASPQ7Z6J2 395 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 SMYD4Q8IYR2 804 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 PDCL2Q8N4E4 241 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 OR10T2Q8NGX3 314 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 ERCC4Q92889 916 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 ACBD6Q9BR61 282 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 C1QTNF1Q9BXJ1 281 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 AVENQ9NQS1 362 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 L1RE1Q9UN81 338 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 POLIQ9UNA4 740 aa16.58■□□□□ 0.24
COMMD4-212ENST00000565517 ZFP37Q9Y6Q3 630 aaPredicted RBP16.58■□□□□ 0.24
COMMD4-212ENST00000565517 MTMR11A4FU01 709 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 LRRIQ3A6PVS8 624 aaPredicted RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 GABRDO14764 452 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 AKAP3O75969 853 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 VNN2O95498 520 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 C4BPAP04003 597 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 PTPN2P17706 415 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 FSHRP23945 695 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 PSMC2P35998 433 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 LHX1P48742 406 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 TRPC3Q13507 836 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 INTS8Q75QN2 995 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 DCP1BQ8IZD4 617 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 ADSSL1Q8N142 457 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 C2orf15Q8WU43 125 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 TMEM209Q96SK2 561 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 MKNK1Q9BUB5 465 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 VRTNQ9H8Y1 702 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 EPS15L1Q9UBC2 864 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 DNMT3BQ9UBC3 853 aaKnown RBP16.57■□□□□ 0.24
COMMD4-212ENST00000565517 MUTYHQ9UIF7 546 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 MAN1B1Q9UKM7 699 aa16.57■□□□□ 0.24
COMMD4-212ENST00000565517 N4BP1O75113 896 aaKnown RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 PHACTR2O75167 634 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 VAMP7P51809 220 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 MYL7Q01449 175 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 TSPY1Q01534 308 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 DUSP4Q13115 394 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 PLD1Q13393 1074 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 STIM1Q13586 685 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 PTPN21Q16825 1174 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 SOWAHAQ2M3V2 549 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 PABPC1LQ4VXU2 614 aaKnown RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 SLC39A12Q504Y0 691 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 TDRD10Q5VZ19 366 aaKnown RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 ADGRF2Q8IZF7 708 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 ELMOD1Q8N336 334 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 SYAP1Q96A49 352 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 DHTKD1Q96HY7 919 aaPredicted RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 IPO9Q96P70 1041 aaKnown RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 PGLYRP2Q96PD5 576 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 TSG101Q99816 390 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 DDX43Q9NXZ2 648 aaKnown RBP16.56■□□□□ 0.24
COMMD4-212ENST00000565517 LIMD1Q9UGP4 676 aa16.56■□□□□ 0.24
COMMD4-212ENST00000565517 CETN3O15182 167 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 GPR37L1O60883 481 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 RHOP08100 348 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 KRT13P13646 458 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 PCSK1P29120 753 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 GBP2P32456 591 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ALDH1A3P47895 512 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 TUFMP49411 452 aaKnown RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 MYL6P60660 151 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 DLG4P78352 724 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 FKBP3Q00688 224 aaKnown RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 LRRC63Q05C16 580 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 TWF1Q12792 350 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 NFE2Q16621 373 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ZACNQ401N2 412 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 LRRTM3Q86VH5 581 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ZC3H3Q8IXZ2 948 aaKnown RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 FAM186BQ8IYM0 893 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ATAD1Q8NBU5 361 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 LEMD2Q8NC56 503 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 SPPL2BQ8TCT7 592 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 EDAQ92838 391 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 NXPE3Q969Y0 559 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ZNF512Q96ME7 567 aaPredicted RBP16.55■□□□□ 0.24
COMMD4-212ENST00000565517 MYADMQ96S97 322 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 XYLT2Q9H1B5 865 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 CRISPLD1Q9H336 500 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 HCFC1R1Q9NWW0 138 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 IGSF9Q9P2J2 1179 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 SORCS3Q9UPU3 1222 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 ASB3Q9Y575 518 aa16.55■□□□□ 0.24
COMMD4-212ENST00000565517 PSMA7O14818 248 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 TACC1O75410 805 aa16.54■□□□□ 0.24
COMMD4-212ENST00000565517 MICAL2O94851 1124 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms