RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 F13A1P00488 732 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 GLULP15104 373 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 GJA1P17302 382 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 TUFMP49411 452 aaKnown RBP21.44■■□□□ 1.02
CLN6-206ENST00000565471 SLC39A12Q504Y0 691 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 WSCD1Q658N2 575 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 ITIH5Q86UX2 942 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 GPD1LQ8N335 351 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 TTC9BQ8N6N2 239 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 ZSCAN18Q8TBC5 510 aaPredicted RBP21.44■■□□□ 1.02
CLN6-206ENST00000565471 KCNG4Q8TDN1 519 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 DEPDC1BQ8WUY9 529 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 NKD2Q969F2 451 aaPredicted RBP21.44■■□□□ 1.02
CLN6-206ENST00000565471 E2F7Q96AV8 911 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 DHX58Q96C10 678 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 NELL2Q99435 816 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 TRMT61BQ9BVS5 477 aaKnown RBP21.44■■□□□ 1.02
CLN6-206ENST00000565471 MAGEF1Q9HAY2 307 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 LTB4R2Q9NPC1 389 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 COL4A3Q01955 1670 aa21.44■■□□□ 1.02
CLN6-206ENST00000565471 A0A1W2PRU2 124 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 GOLGA8IPA6NC78 632 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 GOLGA8JA6NMD2 632 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 EIF3DO15371 548 aaKnown RBP eCLIP21.43■■□□□ 1.02
CLN6-206ENST00000565471 FGF19O95750 216 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 PSMC3P17980 439 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 POLR2BP30876 1174 aaKnown RBP21.43■■□□□ 1.02
CLN6-206ENST00000565471 MAGEA9P43362 315 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 GRM2Q14416 872 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 ATL3Q6DD88 541 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 VITQ6UXI7 678 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 TPRG1Q6ZUI0 275 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 ASCL5Q7RTU5 278 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 DNAJB7Q7Z6W7 309 aaPredicted RBP21.43■■□□□ 1.02
CLN6-206ENST00000565471 C1orf210Q8IVY1 113 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 LRRC52Q8N7C0 313 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 C1orf127Q8N9H9 656 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 SPPL2BQ8TCT7 592 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 IRF7Q92985 503 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 BCO2Q9BYV7 579 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 BRD9Q9H8M2 597 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 TRPV5Q9NQA5 729 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 ITGA11Q9UKX5 1188 aa21.43■■□□□ 1.02
CLN6-206ENST00000565471 ITGB3P05106 788 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 ASIC1P78348 528 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 UBXN2BQ14CS0 331 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 FOXD4L5Q5VV16 416 aaPredicted RBP21.42■■□□□ 1.02
CLN6-206ENST00000565471 DCP1BQ8IZD4 617 aaKnown RBP21.42■■□□□ 1.02
CLN6-206ENST00000565471 CXorf38Q8TB03 319 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 FOXD4L4Q8WXT5 416 aaPredicted RBP21.42■■□□□ 1.02
CLN6-206ENST00000565471 C7orf25Q9BPX7 421 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 PCIF1Q9H4Z3 704 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 SLITRK6Q9H5Y7 841 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 HEBP1Q9NRV9 189 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 AGAP1Q9UPQ3 857 aa21.42■■□□□ 1.02
CLN6-206ENST00000565471 MRPS17Q9Y2R5 130 aaKnown RBP21.42■■□□□ 1.02
CLN6-206ENST00000565471 FAM170BA6NMN3 283 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 LRRN2O75325 713 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 SOAT2O75908 522 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 VIPR2P41587 438 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 VEPH1Q14D04 833 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 MGAT5BQ3V5L5 792 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 ZNF852Q6ZMS4 543 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 EPM2AIP1Q7L775 607 aaPredicted RBP21.41■■□□□ 1.02
CLN6-206ENST00000565471 LRRTM3Q86VH5 581 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 MFSD6LQ8IWD5 586 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 GLIS3Q8NEA6 775 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 SEPT5Q99719 369 aaPredicted RBP21.41■■□□□ 1.02
CLN6-206ENST00000565471 PDE11AQ9HCR9 933 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 ZNF334Q9HCZ1 680 aaPredicted RBP21.41■■□□□ 1.02
CLN6-206ENST00000565471 MTF2Q9Y483 593 aaPredicted RBP21.41■■□□□ 1.02
CLN6-206ENST00000565471 COL4A2P08572 1712 aa21.41■■□□□ 1.02
CLN6-206ENST00000565471 ATF6P18850 670 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 GDI1P31150 447 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 HOXD13P35453 343 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 RBP5P82980 135 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 SURF1Q15526 300 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 FAM26FQ5R3K3 315 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 GAREM2Q75VX8 874 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 TMEM86AQ8N2M4 240 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 PDCL2Q8N4E4 241 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 CSGALNACT2Q8N6G5 542 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 SPATA18Q8TC71 538 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 ZNF507Q8TCN5 953 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 NOC3LQ8WTT2 800 aaKnown RBP21.4■■□□□ 1.02
CLN6-206ENST00000565471 HPS3Q969F9 1004 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 CLDN23Q96B33 292 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 SEMA4AQ9H3S1 761 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 KIAA1586Q9HCI6 787 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 GDAP2Q9NXN4 497 aa21.4■■□□□ 1.02
CLN6-206ENST00000565471 UBE4BO95155 1302 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 ZNF233A6NK53 670 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 SHISA7A6NL88 538 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 HEPACAM2A8MVW5 462 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 MAN2B1O00754 1011 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 NCAM2O15394 837 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 POLR2DO15514 142 aaKnown RBP21.39■■□□□ 1.01
CLN6-206ENST00000565471 HUS1O60921 280 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 TMEM191BP0C7N4 346 aa21.39■■□□□ 1.01
CLN6-206ENST00000565471 HAPLN1P10915 354 aaPredicted RBP21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms