RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 HARSP12081 509 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 ATP4AP20648 1035 aa16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 CETN2P41208 172 aa16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 LMNB2Q03252 620 aa16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 DNAJC3Q13217 504 aa16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 PKN2Q16513 984 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 RNF43Q68DV7 783 aa16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
GTF3C1-205ENST00000564747 ARID2Q68CP9 1835 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 FER1L6Q2WGJ9 1857 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 H0YCG3 227 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 ANP32DO95626 131 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 CST3P01034 146 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 ALADP13716 330 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 MMP8P22894 467 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 SP2Q02086 613 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 MYO1EQ12965 1108 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 XKR3Q5GH77 459 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 C4orf33Q8N1A6 199 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 ALLCQ8N6M5 410 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 MCEEQ96PE7 176 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 SLCO1B3Q9NPD5 702 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 GRID1Q9ULK0 1009 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 CNTN6Q9UQ52 1028 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 TJP3O95049 919 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 GLRA2P23416 452 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 OGDHQ02218 1023 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 NCOA4Q13772 614 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 NAA25Q14CX7 972 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 WDR72Q3MJ13 1102 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 ZNF394Q53GI3 561 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 EAPPQ56P03 285 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 RIBC1Q8N443 379 aaPredicted RBP16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 DENND1AQ8TEH3 1009 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 RBM41Q96IZ5 413 aaKnown RBP16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 FOXP3Q9BZS1 431 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 VPS37BQ9H9H4 285 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 EBF2Q9HAK2 575 aa16.35■□□□□ 0.21
GTF3C1-205ENST00000564747 BANF1O75531 89 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 KRT15P19012 456 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 MSH2P43246 934 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 SPOCD1Q6ZMY3 1216 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 NIM1KQ8IY84 436 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 ZBED8Q8IZ13 594 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 DEPTORQ8TB45 409 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 CCHCR1Q8TD31 782 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 L3MBTL3Q96JM7 780 aaPredicted RBP16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 TMEM121Q9BTD3 319 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 TRABDQ9H4I3 376 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 CNTNAP2Q9UHC6 1331 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 TBXAS1P24557 533 aaPredicted RBP16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 RPA3P35244 121 aaPredicted RBP16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 PSMC4P43686 418 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 NSMCE1Q8WV22 266 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 GRAMD1AQ96CP6 724 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 CGRRF1Q99675 332 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 PHTF1Q9UMS5 762 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 NFASCO94856 1347 aa16.34■□□□□ 0.21
GTF3C1-205ENST00000564747 A0A0B4J269 797 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 GOLGA8SH3BPF8 625 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 GOLGA8MH3BSY2 632 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 ECM2O94769 699 aaPredicted RBP16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 IFNB1P01574 187 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 PLCB3Q01970 1234 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 ACVR2BQ13705 512 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 DRICH1Q6PGQ1 229 aaPredicted RBP16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 MYLK2Q9H1R3 596 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 PORCNQ9H237 461 aa16.33■□□□□ 0.21
GTF3C1-205ENST00000564747 A0A1W2PPM1 405 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 TTLL13PA6NNM8 815 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 SUPT20HL2P0C7V6 817 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 CCNB1P14635 433 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 CCDC142Q17RM4 750 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 SUPT20HL1Q3ZLR7 823 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 SLFN12LQ6IEE8 588 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 DCUN1D2Q6PH85 259 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 KIRREL3Q8IZU9 778 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 C10orf88Q9H8K7 445 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 ETNK1Q9HBU6 452 aa16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 SAE1Q9UBE0 346 aaPredicted RBP16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 MYH9P35579 1960 aaKnown RBP16.33■□□□□ 0.2
GTF3C1-205ENST00000564747 PIAS1O75925 651 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 UNC5CO95185 931 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ZNF132P52740 706 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 OASLQ15646 514 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 RNASEH2BQ5TBB1 312 aaKnown RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 CEP128Q6ZU80 1094 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 TDRPQ86YL5 185 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ANKMY2Q8IV38 441 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 TTC25Q96NG3 672 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 STARD13Q9Y3M8 1113 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 hCG_1818297A0A087WSY0 165 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 LRRD1A4D1F6 860 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 SPATA31C2B4DYI2 1134 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 ALOX15BO15296 676 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 MAGEB2O15479 319 aa16.32■□□□□ 0.2
GTF3C1-205ENST00000564747 PRPF4O43172 522 aaKnown RBP eCLIP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms