RNA–Protein interactions for RNA: ENST00000564734.5

HERC2-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 3,121 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-207ENST00000564734 SSC5DA1L4H1 1573 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 DNALI1O14645 258 aaPredicted RBP16.13■□□□□ 0.17
HERC2-207ENST00000564734 CDH16O75309 829 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 CALB1P05937 261 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 BRAFP15056 766 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 EDNRBP24530 442 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 GCAP28676 217 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 MAGEA4P43358 317 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 ALLCQ8N6M5 410 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 MAML1Q92585 1016 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 C9orf72Q96LT7 481 aa16.13■□□□□ 0.17
HERC2-207ENST00000564734 F8VP50 259 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 SSR1P43307 286 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 MYL6P60660 151 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 SF3A3Q12874 501 aaKnown RBP eCLIP16.12■□□□□ 0.174e-11■■■□□ 18.8
HERC2-207ENST00000564734 SPOCD1Q6ZMY3 1216 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 FAM228AQ86W67 206 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 CCHCR1Q8TD31 782 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 RBM15Q96T37 977 aaKnown RBP eCLIP16.12■□□□□ 0.17
HERC2-207ENST00000564734 GH1P01241 217 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 COPS2P61201 443 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 GALNTL6Q49A17 601 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 CDCA2Q69YH5 1023 aaPredicted RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 TXNRD3NBQ6F5E7 133 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 APOBEC3FQ8IUX4 373 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 PARP9Q8IXQ6 854 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 PRPF31Q8WWY3 499 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 KCNK9Q9NPC2 374 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 ABCF3Q9NUQ8 709 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 FGFR1OP2Q9NVK5 253 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 USP15Q9Y4E8 981 aaPredicted RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 MGRN1O60291 552 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 TJP3O95049 919 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 KRT1P04264 644 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 ZSCAN5DPP0CG00 497 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 HARSP12081 509 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 BRD2P25440 801 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 NF2P35240 595 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 GSTA5Q7RTV2 222 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 NIPA2Q8N8Q9 360 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 ANKRD42Q8N9B4 389 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 ACO2Q99798 780 aaKnown RBP16.12■□□□□ 0.17
HERC2-207ENST00000564734 ZNF518BQ9C0D4 1074 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 PRKAG3Q9UGI9 489 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
HERC2-207ENST00000564734 hCG_1818297A0A087WSY0 165 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 TOM1L1O75674 476 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 CETN2P41208 172 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 STAT5BP51692 787 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 OASLQ15646 514 aaKnown RBP16.11■□□□□ 0.17
HERC2-207ENST00000564734 CEP128Q6ZU80 1094 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 RIBC1Q8N443 379 aaPredicted RBP16.11■□□□□ 0.17
HERC2-207ENST00000564734 TRPM4Q8TD43 1214 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 DYDC1Q8WWB3 177 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 TFAP2BQ92481 460 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 MCEEQ96PE7 176 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 IMPG2Q9BZV3 1241 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 MTMR12Q9C0I1 747 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 CISHQ9NSE2 258 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 CLEC11AQ9Y240 323 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 SOWAHBA6NEL2 793 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 PEX10O60683 326 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 ETS1P14921 441 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 EFNA5P52803 228 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 KAZNQ674X7 775 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 SMYD5Q6GMV2 418 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 ANKRD35Q8N283 1001 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 NIF3L1Q9GZT8 377 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 CD248Q9HCU0 757 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 MLXIPLQ9NP71 852 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 CPSF3Q9UKF6 684 aaKnown RBP16.11■□□□□ 0.17
HERC2-207ENST00000564734 WDR90Q96KV7 1748 aa16.11■□□□□ 0.17
HERC2-207ENST00000564734 C3orf70A6NLC5 250 aaPredicted RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 CHUKO15111 745 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 ELF3P78545 371 aaPredicted RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 PRKG1Q13976 671 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 SGSM1Q2NKQ1 1148 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 CGB2Q6NT52 195 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 DNAJC24Q6P3W2 148 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 LBX2Q6XYB7 198 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 ZBTB33Q86T24 672 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 TDRPQ86YL5 185 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 TMEM35BQ8NCS4 154 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 CCDC77Q9BR77 488 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 MRPL4Q9BYD3 311 aaKnown RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 TBK1Q9UHD2 729 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 EIF4BP23588 611 aaKnown RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 CDKN2BP42772 138 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 TAP1Q03518 808 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 PIGHQ14442 188 aaPredicted RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 WDR72Q3MJ13 1102 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 GPC2Q8N158 579 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 MAGEB18Q96M61 343 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 BTBD7Q9P203 1132 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 TPX2Q9ULW0 747 aaKnown RBP16.1■□□□□ 0.17
HERC2-207ENST00000564734 AGAP1Q9UPQ3 857 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
HERC2-207ENST00000564734 OGTO15294 1046 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms