RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 MAFFQ9ULX9 164 aa17.14■□□□□ 0.33
RAB40C-208ENST00000564703 N4BP1O75113 896 aaKnown RBP17.13■□□□□ 0.33
RAB40C-208ENST00000564703 TBX10O75333 385 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 VNN1O95497 513 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 PCSK1P29120 753 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 GNL1P36915 607 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-208ENST00000564703 TSPY1Q01534 308 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 ROR1Q01973 937 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 ITIH3Q06033 890 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 SOWAHAQ2M3V2 549 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 UVSSAQ2YD98 709 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 RSPO2Q6UXX9 243 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-208ENST00000564703 C15orf39Q6ZRI6 1047 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 RTL10Q7L3V2 364 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB40C-208ENST00000564703 ADGRF2Q8IZF7 708 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 FBXL13Q8NEE6 735 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 APOL5Q9BWW9 433 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 THAP9Q9H5L6 903 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 SFXN1Q9H9B4 322 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 DDX43Q9NXZ2 648 aaKnown RBP17.13■□□□□ 0.33
RAB40C-208ENST00000564703 L1RE1Q9UN81 338 aa17.13■□□□□ 0.33
RAB40C-208ENST00000564703 CCDC195A0A1B0GUA6 201 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 PRRG1O14668 218 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ABLIM3O94929 683 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ATF2P15336 505 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 MTIF2P46199 727 aaKnown RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 MARSP56192 900 aaKnown RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 SMARCB1Q12824 385 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 GPR17Q13304 367 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 PPM1LQ5SGD2 360 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ATAT1Q5SQI0 421 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 RARS2Q5T160 578 aaKnown RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 PTCRAQ6ISU1 281 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 OR6B3Q8NGW1 331 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ENOX1Q8TC92 643 aaKnown RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 SLC35C1Q96A29 364 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 MSLNLQ96KJ4 702 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ASB2Q96Q27 587 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 ACBD6Q9BR61 282 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 DNAI2Q9GZS0 605 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 XYLT2Q9H1B5 865 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 VRTNQ9H8Y1 702 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 PIDD1Q9HB75 910 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 RAB20Q9NX57 234 aa17.12■□□□□ 0.33
RAB40C-208ENST00000564703 AFF4Q9UHB7 1163 aaKnown RBP17.12■□□□□ 0.33
RAB40C-208ENST00000564703 WDR27A2RRH5 827 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 TACC1O75410 805 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 ZMYND10O75800 440 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 TRIM21P19474 475 aaKnown RBP17.11■□□□□ 0.33
RAB40C-208ENST00000564703 FMO5P49326 533 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 TYRO3Q06418 890 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 ADCY1Q08828 1119 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 KCNH2Q12809 1159 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 SYCE2Q6PIF2 218 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 TMC5Q6UXY8 1006 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 TRIM59Q8IWR1 403 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 C12orf76Q8N812 135 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-208ENST00000564703 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.11■□□□□ 0.33
RAB40C-208ENST00000564703 PI4K2AQ9BTU6 479 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 ADAM7Q9H2U9 754 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 ZDHHC7Q9NXF8 308 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 BRWD1Q9NSI6 2320 aa17.11■□□□□ 0.33
RAB40C-208ENST00000564703 MTCL1Q9Y4B5 1905 aaKnown RBP17.11■□□□□ 0.33
RAB40C-208ENST00000564703 GABRDO14764 452 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 P4HA2O15460 535 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 ASS1P00966 412 aaKnown RBP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 AFPP02771 609 aaKnown RBP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 C8AP07357 584 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 HNRNPA1P09651 372 aaKnown RBP eCLIP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 OR4Q2P0C623 313 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 WARSP23381 471 aaKnown RBP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 SMAD4Q13485 552 aaKnown RBP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 SLC39A12Q504Y0 691 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 CYP26C1Q6V0L0 522 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 RNF19BQ6ZMZ0 732 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 CNOT6LQ96LI5 555 aaKnown RBP17.1■□□□□ 0.33
RAB40C-208ENST00000564703 RIPOR3Q96MK2 946 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 MED15Q96RN5 788 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 ZCWPW1Q9H0M4 648 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.1■□□□□ 0.331e-6■■■■■ 54.5
RAB40C-208ENST00000564703 FBXW11Q9UKB1 542 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 CDH9Q9ULB4 789 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 POLIQ9UNA4 740 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 NFE2L3Q9Y4A8 694 aa17.1■□□□□ 0.33
RAB40C-208ENST00000564703 CDH23Q9H251 3354 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 A8MXQ7 604 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 PMM2O15305 246 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 MBTPS2O43462 519 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 XYLBO75191 536 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 LRG1P02750 347 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 TPM2P07951 284 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 MTHFRP42898 656 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 NOP14P78316 857 aaKnown RBP17.09■□□□□ 0.33
RAB40C-208ENST00000564703 NFKBIBQ15653 356 aa17.09■□□□□ 0.33
RAB40C-208ENST00000564703 MAPRE1Q15691 268 aaKnown RBP17.09■□□□□ 0.33
RAB40C-208ENST00000564703 NFE2Q16621 373 aaPredicted RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms