RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TMEM174Q8WUU8 243 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 ACSF2Q96CM8 615 aaPredicted RBP10.69□□□□□ -0.7
CDH1-206ENST00000564676 PGLYRP2Q96PD5 576 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 TSG101Q99816 390 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 USTQ9Y2C2 406 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 CUL9Q8IWT3 2517 aa10.69□□□□□ -0.7
CDH1-206ENST00000564676 CLUHO75153 1309 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 CETN3O15182 167 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 CST3P01034 146 aaPredicted RBP10.68□□□□□ -0.7
CDH1-206ENST00000564676 KRT13P13646 458 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 ALADP13716 330 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 GBP2P32456 591 aaPredicted RBP10.68□□□□□ -0.7
CDH1-206ENST00000564676 AP3M2P53677 418 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 GPR17Q13304 367 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 EDRF1Q3B7T1 1238 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 GRASPQ7Z6J2 395 aaPredicted RBP10.68□□□□□ -0.7
CDH1-206ENST00000564676 FAM186BQ8IYM0 893 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 TCEAL8Q8IYN2 117 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 TMEM86AQ8N2M4 240 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 PDCL2Q8N4E4 241 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 TOP6BLQ8N6T0 577 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 OR10T2Q8NGX3 314 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 PLEKHO2Q8TD55 490 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 TMC2Q8TDI7 906 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 ZNF516Q92618 1163 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 TMEM209Q96SK2 561 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 GDAP2Q9NXN4 497 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 MUTYHQ9UIF7 546 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 MAFFQ9ULX9 164 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 INSL5Q9Y5Q6 135 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 VCANP13611 3396 aa10.68□□□□□ -0.7
CDH1-206ENST00000564676 LRRIQ3A6PVS8 624 aaPredicted RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 BIN1O00499 593 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 PSMA7O14818 248 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 MAPK13O15264 365 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 DCXO43602 365 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 AKAP3O75969 853 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 PAPLNO95428 1278 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 POU2F2P09086 479 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 EPB41P11171 864 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 FSHRP23945 695 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 PSMC2P35998 433 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 PPP1R2P41236 205 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 LHX1P48742 406 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 VAMP7P51809 220 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 TNNC1P63316 161 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 NTHL1P78549 312 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 MYL7Q01449 175 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 TSPY1Q01534 308 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 TWF1Q12792 350 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 DUSP4Q13115 394 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 CAMK4Q16566 473 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 SLC39A12Q504Y0 691 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 ZCWPW2Q504Y3 356 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 COBLL1Q53SF7 1204 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 IQCEQ6IPM2 695 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 INTS8Q75QN2 995 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 GET4Q7L5D6 327 aaPredicted RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 DPH6Q7L8W6 267 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 DCP1BQ8IZD4 617 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 ADGRF2Q8IZF7 708 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 ELMOD1Q8N336 334 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 ATAD1Q8NBU5 361 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDH1-206ENST00000564676 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 ZNF512Q96ME7 567 aaPredicted RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 GBP4Q96PP9 640 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 MMS19Q96T76 1030 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 RTP3Q9BQQ7 232 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 ZCWPW1Q9H0M4 648 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 GZF1Q9H116 711 aaPredicted RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 EPHX3Q9H6B9 360 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 DDX43Q9NXZ2 648 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 DNMT3BQ9UBC3 853 aaKnown RBP10.67□□□□□ -0.7
CDH1-206ENST00000564676 LIMD1Q9UGP4 676 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 L1RE1Q9UN81 338 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 SLC27A5Q9Y2P5 690 aa10.67□□□□□ -0.7
CDH1-206ENST00000564676 MTMR11A4FU01 709 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 PI4K2BG5E9Z4 385 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 IKBKBO14920 756 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 C4BPAP04003 597 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 CHRM1P11229 460 aaPredicted RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 PTPN2P17706 415 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 ACAT1P24752 427 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 CCNE1P24864 410 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 PCSK1P29120 753 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 ATICP31939 592 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 ALDH1A3P47895 512 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 CDR1P51861 262 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 EPHB3P54753 998 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 MYL6P60660 151 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 DLG4P78352 724 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 CLDN10P78369 228 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 FKBP3Q00688 224 aaKnown RBP10.66□□□□□ -0.7
CDH1-206ENST00000564676 SMARCB1Q12824 385 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 PLD1Q13393 1074 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 NCOA4Q13772 614 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 SOWAHAQ2M3V2 549 aa10.66□□□□□ -0.7
CDH1-206ENST00000564676 WDR72Q3MJ13 1102 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms