RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 FMR1NBQ8N0W7 255 aaPredicted RBP19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 OR10T2Q8NGX3 314 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 CXorf38Q8TB03 319 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 RSAD2Q8WXG1 361 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 FGF13Q92913 245 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 CGRRF1Q99675 332 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 ZCWPW1Q9H0M4 648 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 SMOC2Q9H3U7 446 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 GDAP2Q9NXN4 497 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 SNX9Q9Y5X1 595 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 PTPRJQ12913 1337 aa19.74■□□□□ 0.75
SYNGR3-204ENST00000564642 TECTAO75443 2155 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 MTMR11A4FU01 709 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 PDXKO00764 312 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 ZNF197O14709 1029 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 CALUO43852 315 aaPredicted RBP19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 MRE11P49959 708 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 EPHB3P54753 998 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 KCNB1Q14721 858 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 CYP4A22Q5TCH4 519 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 SCARA3Q6AZY7 606 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 CENPPQ6IPU0 288 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 SLC9A9Q8IVB4 645 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 DCP1BQ8IZD4 617 aaKnown RBP19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 TMEM86AQ8N2M4 240 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 PDCL2Q8N4E4 241 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 ATAD1Q8NBU5 361 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 ING5Q8WYH8 240 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 ASIC4Q96FT7 647 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 HPDLQ96IR7 371 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 RTP3Q9BQQ7 232 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 KCTD10Q9H3F6 313 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 AVENQ9NQS1 362 aaPredicted RBP19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 CIZ1Q9ULV3 898 aaPredicted RBP19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 SLC27A5Q9Y2P5 690 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 YIPF1Q9Y548 306 aa19.73■□□□□ 0.75
SYNGR3-204ENST00000564642 VNN2O95498 520 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 MYL7Q01449 175 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 SMARCB1Q12824 385 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 PDZD4Q76G19 769 aaPredicted RBP19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 TRAPPC11Q7Z392 1133 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 SUGP1Q8IWZ8 645 aaKnown RBP19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 SLC44A3Q8N4M1 653 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 TOP6BLQ8N6T0 577 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 C2orf15Q8WU43 125 aaKnown RBP19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 DMAC2Q9NW81 257 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 DDX43Q9NXZ2 648 aaKnown RBP19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 CEP72Q9P209 647 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 HSFX1Q9UBD0 423 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 L1RE1Q9UN81 338 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 DUSP12Q9UNI6 340 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 MAPK8IP1Q9UQF2 711 aa19.72■□□□□ 0.75
SYNGR3-204ENST00000564642 ANHXE9PGG2 379 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 NR3C1P04150 777 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 TUFMP49411 452 aaKnown RBP19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 TSPY1Q01534 308 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 FAM160A1Q05DH4 1040 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 SLC5A9Q2M3M2 681 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 MTSS1LQ765P7 747 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 DPH6Q7L8W6 267 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 LEMD2Q8NC56 503 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 TMEM174Q8WUU8 243 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 MCRS1Q96EZ8 462 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 CRISPLD1Q9H336 500 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 ASAH2Q9NR71 780 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 HOOK1Q9UJC3 728 aaKnown RBP19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 FRMD4BQ9Y2L6 1034 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 NUMBLQ9Y6R0 609 aa19.71■□□□□ 0.75
SYNGR3-204ENST00000564642 PHACTR2O75167 634 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 CST3P01034 146 aaPredicted RBP19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 MYL4P12829 197 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 LHX1P48742 406 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 TRPC3Q13507 836 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 PNOCQ13519 176 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 SNW1Q13573 536 aaKnown RBP19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 HTR4Q13639 388 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 MGAT5BQ3V5L5 792 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 CEP135Q66GS9 1140 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 LRRTM3Q86VH5 581 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 NPAS3Q8IXF0 933 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 ADGRF2Q8IZF7 708 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 HS6ST3Q8IZP7 471 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 FBXL6Q8N531 539 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 ENGASEQ8NFI3 743 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 ST13P5Q8NFI4 369 aaPredicted RBP19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 SPATA18Q8TC71 538 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 SPPL2BQ8TCT7 592 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 MMS19Q96T76 1030 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 SEPT5Q99719 369 aaPredicted RBP19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 ACBD6Q9BR61 282 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 RMND1Q9NWS8 449 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 GDE1Q9NZC3 331 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 FBXL21Q9UKT6 434 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 TRAF3IP3Q9Y228 551 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 ASB3Q9Y575 518 aa19.7■□□□□ 0.74
SYNGR3-204ENST00000564642 MICAL2O94851 1124 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 CASP4P49662 377 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 CDR1P51861 262 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 AP3M2P53677 418 aa19.69■□□□□ 0.74
SYNGR3-204ENST00000564642 SOWAHAQ2M3V2 549 aa19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms