RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 SLC39A12Q504Y0 691 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 CSGALNACT2Q8N6G5 542 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 DNAJC25Q9H1X3 360 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 ASAH2Q9NR71 780 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 SLC2A4RGQ9NR83 387 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 GDE1Q9NZC3 331 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 SIX4Q9UIU6 781 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 ITGA11Q9UKX5 1188 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 HPSEQ9Y251 543 aa21.53■■□□□ 1.04
SHCBP1-203ENST00000564272 CLIC2O15247 247 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 KLRC4O43908 158 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 KRT19P08727 400 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 GJA1P17302 382 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 CYP2J2P51589 502 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 BMT2Q1RMZ1 405 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 CYP4A22Q5TCH4 519 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 OR5B17Q8NGF7 314 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 PRRX2Q99811 253 aa21.52■■□□□ 1.04
SHCBP1-203ENST00000564272 ZNF197O14709 1029 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 MOSPD3O75425 235 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 EPHB3P54753 998 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 EPHA5P54756 1037 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 PTPN5P54829 565 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 GPC5P78333 572 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 PLD1Q13393 1074 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 SNRNP35Q16560 246 aaKnown RBP21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 THEM5Q8N1Q8 247 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 PDCL2Q8N4E4 241 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 LRRC52Q8N7C0 313 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 RDH13Q8NBN7 331 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 ANKRD36BP1Q96IX9 119 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 SEPT5Q99719 369 aaPredicted RBP21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 ARHGEF3Q9NR81 526 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 INTS13Q9NVM9 706 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 L1RE1Q9UN81 338 aa21.51■■□□□ 1.03
SHCBP1-203ENST00000564272 COL4A3Q01955 1670 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 PI15O43692 258 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 AOC1P19801 751 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 ALDH1A3P47895 512 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 CLCN5P51795 746 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 RBP5P82980 135 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 LRRTM3Q86VH5 581 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 TMC8Q8IU68 726 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 SHKBP1Q8TBC3 707 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 LRRC3Q9BY71 257 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 PLA2G2FQ9BZM2 168 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 TBC1D17Q9HA65 648 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 KIAA1586Q9HCI6 787 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 EXOC1Q9NV70 894 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 ATP6V1DQ9Y5K8 247 aa21.5■■□□□ 1.03
SHCBP1-203ENST00000564272 MICAL2O94851 1124 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 TNNC2P02585 160 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 RFX1P22670 979 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 FCARP24071 287 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 NDUFA8P51970 172 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 SURF1Q15526 300 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 TEAD2Q15562 447 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 KNOP1Q1ED39 458 aaKnown RBP21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 KMT5BQ4FZB7 885 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 FAM78AQ5JUQ0 283 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 TANGO2Q6ICL3 276 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 HS2ST1Q7LGA3 356 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 LEMD2Q8NC56 503 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 KIAA0895Q8NCT3 520 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 ZSWIM3Q96MP5 696 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 GDPD2Q9HCC8 539 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 USP25Q9UHP3 1055 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 SNX9Q9Y5X1 595 aa21.49■■□□□ 1.03
SHCBP1-203ENST00000564272 STK25O00506 426 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 GALR2O43603 387 aaPredicted RBP21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 ECI2O75521 394 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 PRR29P0C7W0 189 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 DLATP10515 647 aaKnown RBP21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 SYKP43405 635 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 CYP24A1Q07973 514 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 STK4Q13043 487 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 MGAT5BQ3V5L5 792 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 WDR49Q8IV35 697 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 FSIP1Q8NA03 581 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 XXYLT1Q8NBI6 393 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 PHOX2BQ99453 314 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 LPIN3Q9BQK8 851 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 SCAND2PQ9GZW5 306 aaPredicted RBP21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 GOLPH3LQ9H4A5 285 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 ZNF334Q9HCZ1 680 aaPredicted RBP21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 TMLHEQ9NVH6 421 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 GDAP2Q9NXN4 497 aa21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 ABI2Q9NYB9 513 aaPredicted RBP21.48■■□□□ 1.03
SHCBP1-203ENST00000564272 FAM237AA0A1B0GTK4 181 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 A0A1W2PRU2 124 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 HUS1O60921 280 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 ATF6P18850 670 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 ACAT1P24752 427 aaKnown RBP21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 HOXD11P31277 338 aaPredicted RBP21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 NUBP1P53384 320 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 SNRPFP62306 86 aaKnown RBP21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 BECN1Q14457 450 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 PSMD6Q15008 389 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 DUOXA2Q1HG44 320 aa21.47■■□□□ 1.03
SHCBP1-203ENST00000564272 OSTM1Q86WC4 334 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms