RNA–Protein interactions for RNA: ENST00000563667.5

PDXDC1-209, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 4

Gene PDXDC1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-209ENST00000563667 TAF3Q5VWG9 929 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 DSTYKQ6XUX3 929 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 ZNF571Q7Z3V5 609 aaPredicted RBP16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 SLC47A2Q86VL8 602 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 ZNF280BQ86YH2 543 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 UBR7Q8N806 425 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 MAFAQ8NHW3 353 aaPredicted RBP16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 AGPAT1Q99943 283 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 PAAF1Q9BRP4 392 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 DESI2Q9BSY9 194 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 ACP6Q9NPH0 428 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 SPTLC3Q9NUV7 552 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 LAMA3Q16787 3333 aa16.52■□□□□ 0.24
PDXDC1-209ENST00000563667 TET1Q8NFU7 2136 aa16.52■□□□□ 0.23
PDXDC1-209ENST00000563667 CYB561D2O14569 222 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 CALCAP01258 141 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 CYP11B1P15538 503 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 IGFBP4P22692 258 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 OR1G1P47890 313 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 DCLRE1AQ6PJP8 1040 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 C17orf53Q8N3J3 647 aaPredicted RBP16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 TTC39CQ8N584 583 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 ACRBPQ8NEB7 543 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 APPL2Q8NEU8 664 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 KIAA1524Q8TCG1 905 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 SLC20A1Q8WUM9 679 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 MRPL45Q9BRJ2 306 aaKnown RBP16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 MRPL9Q9BYD2 267 aaKnown RBP16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 CERS4Q9HA82 394 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 GDAP2Q9NXN4 497 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 ADAMTS1Q9UHI8 967 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 CNTN6Q9UQ52 1028 aa16.51■□□□□ 0.23
PDXDC1-209ENST00000563667 EIF3CLB5ME19 914 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 B3GAT3O94766 335 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 IGFBP6P24592 240 aaPredicted RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 GFPT1Q06210 699 aaPredicted RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 NOP9Q86U38 636 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 COLGALT2Q8IYK4 626 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 CRIPAKQ8N1N5 446 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 C3orf58Q8NDZ4 430 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 OR6B3Q8NGW1 331 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 HASPINQ8TF76 798 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 SENP8Q96LD8 212 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 EIF3CQ99613 913 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 PDCL3Q9H2J4 239 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 SNX25Q9H3E2 840 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 NRDE2Q9H7Z3 1164 aa16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 TRMT1Q9NXH9 659 aaKnown RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 PRG3Q9Y2Y8 225 aaPredicted RBP16.5■□□□□ 0.23
PDXDC1-209ENST00000563667 ZSCAN12O43309 604 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 THAP12O43422 761 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 CCDC175P0C221 793 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 CD19P15391 556 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 ANXA13P27216 316 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 GNA15P30679 374 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 NDST1P52848 882 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 KRT83P78385 493 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 CYP27A1Q02318 531 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 DSC1Q08554 894 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 ORC1Q13415 861 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 SOWAHAQ2M3V2 549 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 KIAA1328Q86T90 577 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 GLYCTKQ8IVS8 523 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 TOP6BLQ8N6T0 577 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 EPS8L1Q8TE68 723 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 RSPH1Q8WYR4 309 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 RAD9AQ99638 391 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 DNAJB4Q9UDY4 337 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 NOCTQ9UK39 431 aaKnown RBP16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 BARX2Q9UMQ3 279 aaPredicted RBP16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 L1RE1Q9UN81 338 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 PPP2R2CQ9Y2T4 447 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 ADGRG1Q9Y653 693 aa16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 TDRD15B5MCY1 1934 aaKnown RBP16.49■□□□□ 0.23
PDXDC1-209ENST00000563667 A0A087X0T9 212 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 ESPNB1AK53 854 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 I3L4J1 428 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.232e-13■□□□□ 8.8
PDXDC1-209ENST00000563667 CCP110O43303 1012 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 B4GALT3O60512 393 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 CILPO75339 1184 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 DGKIO75912 1065 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 GJB5O95377 273 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 ALDH2P05091 517 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 MMEP08473 750 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 FAM228BP0C875 321 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 PAX3P23760 479 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 GNL1P36915 607 aaPredicted RBP16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 MAGEA1P43355 309 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 BRCC3P46736 316 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 ZNF132P52740 706 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 RAD23BP54727 409 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 CDR2Q01850 454 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 BMS1Q14692 1282 aaKnown RBP16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 SLC18A3Q16572 532 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 ASTE1Q2TB18 679 aaPredicted RBP16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 TIGD5Q53EQ6 642 aa16.48■□□□□ 0.23
PDXDC1-209ENST00000563667 CCDC122Q5T0U0 273 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms