RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 PHBP35232 272 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ZRSR2Q15696 482 aaKnown RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 KCNT1Q5JUK3 1230 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 CYP4A22Q5TCH4 519 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 FEZF2Q8TBJ5 459 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 MAK16Q9BXY0 300 aaKnown RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 CYP39A1Q9NYL5 469 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 DLGAP2Q9P1A6 1054 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 PCSK1NQ9UHG2 260 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 SBF2Q86WG5 1849 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 SETSIPP0DME0 302 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ESRRAP11474 423 aaPredicted RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ALADP13716 330 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 MARK3P27448 753 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 MAMLD1Q13495 774 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 RCN1Q15293 331 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ANKS1BQ7Z6G8 1248 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 PPFIBP2Q8ND30 876 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 MASTLQ96GX5 879 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 RBM41Q96IZ5 413 aaKnown RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 SENP7Q9BQF6 1050 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TRIM55Q9BYV6 548 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TBC1D22BQ9NU19 505 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 SCINQ9Y6U3 715 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 C2orf71A6NGG8 1288 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 BAG2O95816 211 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 PTDSS1P48651 473 aaKnown RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ARFIP2P53365 341 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 GAD2Q05329 585 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TRIM74Q86UV6 250 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TRIM73Q86UV7 250 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 LRRC6Q86X45 466 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 C12orf56Q8IXR9 622 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 EXD1Q8NHP7 514 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TCP10LQ8TDR4 215 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 SLCO2A1Q92959 643 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM143Q96AN5 459 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 ZBTB45Q96K62 511 aaPredicted RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 TSC22D3Q99576 134 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 RANBP17Q9H2T7 1088 aaKnown RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 DENND2DQ9H6A0 471 aaPredicted RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 AVENQ9NQS1 362 aaPredicted RBP12.45□□□□□ -0.42
ABCA3-203ENST00000563623 CHMP2BQ9UQN3 213 aa12.45□□□□□ -0.42
ABCA3-203ENST00000563623 PSTPIP1O43586 416 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 PEX11AO75192 247 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ENTPD3O75355 529 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 UNGP13051 313 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 CHRNA5P30532 468 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RPS6P62753 249 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 PDK4Q16654 411 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM63BQ5T3F8 832 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 THEMIS2Q5TEJ8 643 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RFWD3Q6PCD5 774 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ENOSF1Q7L5Y1 443 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MCF2L2Q86YR7 1114 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 SEPT12Q8IYM1 358 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RIBC1Q8N443 379 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ANKLE1Q8NAG6 615 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RFWD2Q8NHY2 731 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 FAM210AQ96ND0 272 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 POLR3FQ9H1D9 316 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 LRMDAQ9H2I8 198 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 IP6K2Q9UHH9 426 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MYPNQ86TC9 1320 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 LIASO43766 372 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MAPTP10636 758 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 CCNB1P14635 433 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 POLE2P56282 527 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 TCEAL1Q15170 157 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ZC3H12AQ5D1E8 599 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ZBTB33Q86T24 672 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RCOR2Q8IZ40 523 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 TMC2Q8TDI7 906 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 FBXO41Q8TF61 875 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 PARVAQ9NVD7 372 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 HERC5Q9UII4 1024 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 SERPINA10Q9UK55 444 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 AGO2Q9UKV8 859 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 GRID1Q9ULK0 1009 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 CCDC195A0A1B0GUA6 201 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 NVLO15381 856 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 SMNDC1O75940 238 aaKnown RBP eCLIP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 KITP10721 976 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ABL2P42684 1182 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 YARSP54577 528 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 ARL4CP56559 192 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 NLRP11P59045 1033 aaKnown RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 BLMHQ13867 455 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MAPK6Q16659 721 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 MAP4K3Q8IVH8 894 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 DEPTORQ8TB45 409 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 CALN1Q9BXU9 219 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 TMEM165Q9HC07 324 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 RBAKQ9NYW8 714 aaPredicted RBP12.44□□□□□ -0.42
ABCA3-203ENST00000563623 SLC17A7Q9P2U7 560 aa12.44□□□□□ -0.42
ABCA3-203ENST00000563623 DPPA5A6NC42 116 aa12.43□□□□□ -0.42
ABCA3-203ENST00000563623 H0YIN7 160 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms