RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 SLC47A2Q86VL8 602 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 MAP7D3Q8IWC1 876 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 SLFN12Q8IYM2 578 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CCDC89Q8N998 374 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CCDC110Q8TBZ0 833 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 INPP5DQ92835 1189 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 SLC7A6OSQ96CW6 309 aaPredicted RBP13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CAMKK2Q96RR4 588 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 MMADHCQ9H3L0 296 aaPredicted RBP13.41□□□□□ -0.26
CCDC187-201ENST00000563590 RAVER2Q9HCJ3 691 aaKnown RBP13.41□□□□□ -0.26
CCDC187-201ENST00000563590 CCPG1Q9ULG6 757 aa13.41□□□□□ -0.26
CCDC187-201ENST00000563590 WFS1O76024 890 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 LYNP07948 512 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 KRT10P13645 584 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ETS1P14921 441 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 DSG1Q02413 1049 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 FASTKD3Q14CZ7 662 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 XKR9Q5GH70 373 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 EFCAB3Q8N7B9 438 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SMC1BQ8NDV3 1235 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 GSDMBQ8TAX9 411 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 PYDC1Q8WXC3 89 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ANKRD27Q96NW4 1050 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 P2RX7Q99572 595 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 GLIS2Q9BZE0 524 aaPredicted RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 PI4KBQ9UBF8 816 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 R3HDM2Q9Y2K5 976 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 LAMB2P55268 1798 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 NAV1Q8NEY1 1877 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 E7ENQ6 273 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 FAM86B1E9PN63 330 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MT-ND3P03897 115 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 FAM86B2P0C5J1 330 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 NOVP48745 357 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ARSEP51690 589 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 PEX3P56589 373 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 OSTNP61366 133 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 RABGAP1LQ5R372 815 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 RNF168Q8IYW5 571 aaPredicted RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ETNPPLQ8TBG4 499 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MTBPQ96DY7 904 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 PRR11Q96HE9 360 aaPredicted RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 DDX60LQ5H9U9 1706 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 I3L4J1 428 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 EML1O00423 815 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SLC16A4O15374 487 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SUPT3HO75486 399 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 GGPS1O95749 300 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MYL2P10916 166 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SKIV2L2P42285 1042 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MED21Q13503 144 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 KIF22Q14807 665 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 CYP1B1Q16678 543 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SLC5A9Q2M3M2 681 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MMEL1Q495T6 779 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SEZ6Q53EL9 994 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 DALRD3Q5D0E6 543 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 GPATCH4Q5T3I0 446 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 MIER3Q7Z3K6 550 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 ARHGEF19Q8IW93 802 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 SH3TC2Q8TF17 1288 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 AGBL1Q96MI9 1066 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 FAM210AQ96ND0 272 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 EIF2AK1Q9BQI3 630 aaKnown RBP13.4□□□□□ -0.26
CCDC187-201ENST00000563590 TMEM120AQ9BXJ8 343 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 C10orf88Q9H8K7 445 aa13.4□□□□□ -0.26
CCDC187-201ENST00000563590 RGL2O15211 777 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 YARSP54577 528 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 AP2B1P63010 937 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 TRIP10Q15642 601 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 ATL2Q8NHH9 583 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 PYROXD1Q8WU10 500 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 PCDHB18PQ96TA0 734 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 NAP1L4Q99733 375 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 SLC13A1Q9BZW2 595 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 KIAA1586Q9HCI6 787 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 FAF1Q9UNN5 650 aaPredicted RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 STARD13Q9Y3M8 1113 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 MAST2Q6P0Q8 1798 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 BTAF1O14981 1849 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 ANKRD33BA6NCL7 494 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 GSC2O15499 205 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 EDF1O60869 148 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 SHMT1P34896 483 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 DLG4P78352 724 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 ZC3H12AQ5D1E8 599 aaKnown RBP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 PLA2G4FQ68DD2 849 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 RINLQ6ZS11 566 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 NRG4Q8WWG1 115 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 FAM111AQ96PZ2 611 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 MIPEPQ99797 713 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 PARVGQ9HBI0 331 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 IL1R1P14778 569 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 YWHAGP61981 247 aaKnown RBP eCLIP13.39□□□□□ -0.27
CCDC187-201ENST00000563590 TMPRSS15P98073 1019 aa13.39□□□□□ -0.27
CCDC187-201ENST00000563590 ASPHQ12797 758 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms