RNA–Protein interactions for RNA: ENST00000563297.5

CLK3-211, Transcript of CDC like kinase 3, humanhuman

TSL 4

Gene CLK3, Length 526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-211ENST00000563297 KCNA1Q09470 495 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 MTAPQ13126 283 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 POSTNQ15063 836 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 STXBP5Q5T5C0 1151 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 FAM173BQ6P4H8 233 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 TSSK4Q6SA08 328 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 ARID3BQ8IVW6 561 aaPredicted RBP17.03■□□□□ 0.32
CLK3-211ENST00000563297 ATRIPQ8WXE1 791 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 DNAJC19Q96DA6 116 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 MKNK1Q9BUB5 465 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 ZCWPW1Q9H0M4 648 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 LMAN1LQ9HAT1 526 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 ZSCAN32Q9NX65 697 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 PIAS3Q9Y6X2 628 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 COL4A2P08572 1712 aa17.03■□□□□ 0.32
CLK3-211ENST00000563297 TCHHQ07283 1943 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 SYT1P21579 422 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 TUFMP49411 452 aaKnown RBP17.02■□□□□ 0.32
CLK3-211ENST00000563297 TAF6P49848 677 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 CDR1P51861 262 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 MLLT6P55198 1093 aaPredicted RBP17.02■□□□□ 0.32
CLK3-211ENST00000563297 RESTQ13127 1097 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 SLC39A12Q504Y0 691 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 RRAGBQ5VZM2 374 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 MAMSTRQ6ZN01 415 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 SV2BQ7L1I2 683 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 LRRTM3Q86VH5 581 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 EFCAB13Q8IY85 973 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 POMGNT1Q8WZA1 660 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 HVCN1Q96D96 273 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 LRRC3BQ96PB8 259 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 HINFPQ9BQA5 517 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 PYM1Q9BRP8 204 aaKnown RBP17.02■□□□□ 0.32
CLK3-211ENST00000563297 CHRDQ9H2X0 955 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 ATXN3LQ9H3M9 355 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 MRPL44Q9H9J2 332 aaKnown RBP17.02■□□□□ 0.32
CLK3-211ENST00000563297 PRMT8Q9NR22 394 aaPredicted RBP17.02■□□□□ 0.32
CLK3-211ENST00000563297 SEL1LQ9UBV2 794 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 DSEQ9UL01 958 aa17.02■□□□□ 0.32
CLK3-211ENST00000563297 CHADO15335 359 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 LILRB5O75023 590 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 CHRNB1P11230 501 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 CCNE1P24864 410 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 GABRR2P28476 465 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 CEBPZQ03701 1054 aaKnown RBP17.01■□□□□ 0.31
CLK3-211ENST00000563297 FCHO2Q0JRZ9 810 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 WSCD1Q658N2 575 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 ERMP1Q7Z2K6 904 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 ITIH5Q86UX2 942 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 METTL23Q86XA0 190 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 YAF2Q8IY57 180 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 RMDN1Q96DB5 314 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 TBC1D7Q9P0N9 293 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 CEP250Q9BV73 2442 aa17.01■□□□□ 0.31
CLK3-211ENST00000563297 TSC2P49815 1807 aa17■□□□□ 0.31
CLK3-211ENST00000563297 KPNA7A9QM74 516 aa17■□□□□ 0.31
CLK3-211ENST00000563297 IL18RAPO95256 599 aa17■□□□□ 0.31
CLK3-211ENST00000563297 FGF19O95750 216 aa17■□□□□ 0.31
CLK3-211ENST00000563297 GAP43P17677 238 aa17■□□□□ 0.31
CLK3-211ENST00000563297 ATF6P18850 670 aa17■□□□□ 0.31
CLK3-211ENST00000563297 WNT7BP56706 349 aa17■□□□□ 0.31
CLK3-211ENST00000563297 MGAT5BQ3V5L5 792 aa17■□□□□ 0.31
CLK3-211ENST00000563297 L1TD1Q5T7N2 865 aaKnown RBP17■□□□□ 0.31
CLK3-211ENST00000563297 GPR158Q5T848 1215 aa17■□□□□ 0.31
CLK3-211ENST00000563297 NT5DC4Q86YG4 428 aa17■□□□□ 0.31
CLK3-211ENST00000563297 ZSWIM2Q8NEG5 633 aa17■□□□□ 0.31
CLK3-211ENST00000563297 CSGALNACT1Q8TDX6 532 aa17■□□□□ 0.31
CLK3-211ENST00000563297 ACCSQ96QU6 501 aa17■□□□□ 0.31
CLK3-211ENST00000563297 SEPT5Q99719 369 aaPredicted RBP17■□□□□ 0.31
CLK3-211ENST00000563297 LPIN3Q9BQK8 851 aa17■□□□□ 0.31
CLK3-211ENST00000563297 PANK2Q9BZ23 570 aa17■□□□□ 0.31
CLK3-211ENST00000563297 TDGF1P13385 188 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 SMARCB1Q12824 385 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 FAM200AQ8TCP9 573 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 GIPC2Q8TF65 315 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 C2orf15Q8WU43 125 aaKnown RBP16.99■□□□□ 0.31
CLK3-211ENST00000563297 FAM213AQ9BRX8 229 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 IER2Q9BTL4 223 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 FAM126AQ9BYI3 521 aaPredicted RBP16.99■□□□□ 0.31
CLK3-211ENST00000563297 IL21Q9HBE4 155 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 OBP2AQ9NY56 170 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 EXOC7Q9UPT5 735 aa16.99■□□□□ 0.31
CLK3-211ENST00000563297 A0A087X0B3 334 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 DPYSL4O14531 572 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 GCNT3O95395 438 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 HAPLN1P10915 354 aaPredicted RBP16.98■□□□□ 0.31
CLK3-211ENST00000563297 WEE1P30291 646 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 TXLNAP40222 546 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 SOX9P48436 509 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 CASP5P51878 434 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 KPNA1P52294 538 aaPredicted RBP16.98■□□□□ 0.31
CLK3-211ENST00000563297 CYP4F8P98187 520 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 GAS6Q14393 721 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 VEPH1Q14D04 833 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 SLC39A14Q15043 492 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 SV2CQ496J9 727 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 SCARA3Q6AZY7 606 aa16.98■□□□□ 0.31
CLK3-211ENST00000563297 CCDC73Q6ZRK6 1079 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 170.9 ms