RNA–Protein interactions for RNA: ENST00000563220.1

COMMD4-208, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 1,897 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-208ENST00000563220 NUP85Q9BW27 656 aa19.21■□□□□ 0.67
COMMD4-208ENST00000563220 PCDHGC3Q9UN70 934 aa19.21■□□□□ 0.67
COMMD4-208ENST00000563220 GIT1Q9Y2X7 761 aa19.21■□□□□ 0.67
COMMD4-208ENST00000563220 MTA2O94776 668 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 LRPAP1P30533 357 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 PTP4A2Q12974 167 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 LLGL2Q6P1M3 1020 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 PHLDB2Q86SQ0 1253 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 NT5DC3Q86UY8 548 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 PHF13Q86YI8 300 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 FAM126BQ8IXS8 530 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 SYCE1Q8N0S2 351 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 FRMPD3Q5JV73 1810 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 ARL5CA6NH57 179 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 PDE2AO00408 941 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 TCP1P17987 556 aaKnown RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 RRM1P23921 792 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 IGFBP6P24592 240 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 DNA2P51530 1060 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 SOWAHAQ2M3V2 549 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 ERCC6LQ2NKX8 1250 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 DENND1BQ6P3S1 775 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 RTN4RL1Q86UN2 441 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 C11orf70Q9BRQ4 267 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 FAM124BQ9H5Z6 455 aaPredicted RBP19.2■□□□□ 0.66
COMMD4-208ENST00000563220 ADAM22Q9P0K1 906 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 NME7Q9Y5B8 376 aa19.2■□□□□ 0.66
COMMD4-208ENST00000563220 SCN1AP35498 2009 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 EFCAB8A8MWE9 144 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 KPNA7A9QM74 516 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 KIF4AO95239 1232 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 IBSPP21815 317 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-208ENST00000563220 RAB27AP51159 221 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 RPS6KA1Q15418 735 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 PEX26Q7Z412 305 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 PDCL2Q8N4E4 241 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 C1orf131Q8NDD1 294 aaKnown RBP19.19■□□□□ 0.66
COMMD4-208ENST00000563220 ZNF564Q8TBZ8 553 aaPredicted RBP19.19■□□□□ 0.66
COMMD4-208ENST00000563220 UVRAGQ9P2Y5 699 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 CACNG4Q9UBN1 327 aa19.19■□□□□ 0.66
COMMD4-208ENST00000563220 LSM8O95777 96 aaKnown RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 THP07101 528 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 MYBL1P10243 752 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 CDH5P33151 784 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 TAF6P49848 677 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 SCNN1GP51170 649 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 MMS22LQ6ZRQ5 1243 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 RSRC2Q7L4I2 434 aaKnown RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 TTC39CQ8N584 583 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 RNF169Q8NCN4 708 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 TMEM35BQ8NCS4 154 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 CAGE1Q8TC20 777 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 BTBD6Q96KE9 485 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 HEXIM2Q96MH2 286 aaKnown RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 ZNF560Q96MR9 790 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 RPS6KC1Q96S38 1066 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 NT5C1AQ9BXI3 368 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 SEZ6LQ9BYH1 1024 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 AVENQ9NQS1 362 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 GDAP2Q9NXN4 497 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 ALG6Q9Y672 507 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 VDRP11473 427 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 MMP8P22894 467 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 PNPLA4P41247 253 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 LILRA4P59901 499 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 TRIM11Q96F44 468 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 VCPIP1Q96JH7 1222 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 CALR3Q96L12 384 aaKnown RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 ZNF518BQ9C0D4 1074 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 LHX5Q9H2C1 402 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 TSPYL2Q9H2G4 693 aaPredicted RBP19.18■□□□□ 0.66
COMMD4-208ENST00000563220 RSAD1Q9HA92 442 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 SLC38A7Q9NVC3 462 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 AMFRQ9UKV5 643 aa19.18■□□□□ 0.66
COMMD4-208ENST00000563220 CTAGE15A4D2H0 777 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 MED7O43513 233 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 CTAGE8P0CG41 777 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 C1QBPQ07021 282 aaKnown RBP19.17■□□□□ 0.66
COMMD4-208ENST00000563220 MESDQ14696 234 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 GPNMBQ14956 572 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 ELF2Q15723 593 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 LIMS2Q7Z4I7 341 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 CTAGE6Q86UF2 777 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 ZNF598Q86UK7 904 aaKnown RBP19.17■□□□□ 0.66
COMMD4-208ENST00000563220 ECHDC2Q86YB7 292 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 CTAGE4Q8IX94 777 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 KBTBD7Q8WVZ9 684 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 HES6Q96HZ4 224 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 SMARCAL1Q9NZC9 954 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 EHD2Q9NZN4 543 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 CYTH4Q9UIA0 394 aa19.17■□□□□ 0.66
COMMD4-208ENST00000563220 HCRTO43612 131 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 FGFR1P11362 822 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 SELPP16109 830 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 MNX1P50219 401 aaPredicted RBP19.16■□□□□ 0.66
COMMD4-208ENST00000563220 CNGA2Q16280 664 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 C11orf63Q6NUN7 778 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 PPP1R2P3Q6NXS1 205 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 LRRC8DQ7L1W4 858 aa19.16■□□□□ 0.66
COMMD4-208ENST00000563220 C12orf29Q8N999 325 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms