RNA–Protein interactions for RNA: ENST00000562775.1

SPG7-206, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best)

Gene SPG7, Length 1,595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-206ENST00000562775 INPP5FQ9Y2H2 1132 aa14.97□□□□□ -0.01
SPG7-206ENST00000562775 KIAA0100Q14667 2235 aaKnown RBP14.96□□□□□ -0.01
SPG7-206ENST00000562775 PODXLO00592 558 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 FANCGO15287 622 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 MED7O43513 233 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 MOCS3O95396 460 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 CD19P15391 556 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 BRD2P25440 801 aaKnown RBP14.96□□□□□ -0.01
SPG7-206ENST00000562775 CLCNKBP51801 687 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 UNC93AQ86WB7 457 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 TOP6BLQ8N6T0 577 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 TFAP2BQ92481 460 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 CYFIP2Q96F07 1278 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 UROC1Q96N76 676 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 ZSWIM1Q9BR11 485 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 MRPL45Q9BRJ2 306 aaKnown RBP14.96□□□□□ -0.01
SPG7-206ENST00000562775 KANSL3Q9P2N6 904 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 HMGXB4Q9UGU5 601 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 PCDHGC3Q9UN70 934 aa14.96□□□□□ -0.01
SPG7-206ENST00000562775 TDRD15B5MCY1 1934 aaKnown RBP14.96□□□□□ -0.01
SPG7-206ENST00000562775 NCANO14594 1321 aa14.96□□□□□ -0.02
SPG7-206ENST00000562775 SCN5AQ14524 2016 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 HUS1O60921 280 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 CFHP08603 1231 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 VDRP11473 427 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 ABCB4P21439 1286 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 PAX3P23760 479 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 RFC2P35250 354 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 NAP1L1P55209 391 aaKnown RBP14.95□□□□□ -0.02
SPG7-206ENST00000562775 NOMO3P69849 1222 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 GPC5P78333 572 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 CENPCQ03188 943 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 IFI16Q16666 785 aaKnown RBP14.95□□□□□ -0.02
SPG7-206ENST00000562775 UPP1Q16831 310 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 NOMO2Q5JPE7 1267 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 CLLU1OSQ5K130 101 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 URGCPQ8TCY9 931 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 RFFLQ8WZ73 363 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 ALS2CR12Q96Q35 445 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 THAP2Q9H0W7 228 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 RNF216Q9NWF9 866 aaPredicted RBP14.95□□□□□ -0.02
SPG7-206ENST00000562775 PCDHB7Q9Y5E2 793 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 CAPN6Q9Y6Q1 641 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 TET1Q8NFU7 2136 aa14.95□□□□□ -0.02
SPG7-206ENST00000562775 CASTOR2A6NHX0 329 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 CYB561D2O14569 222 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 BUB1O43683 1085 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 LSM8O95777 96 aaKnown RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 NSFP46459 744 aaKnown RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 TCEAL1Q15170 157 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 TCTN1Q2MV58 587 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 NAA35Q5VZE5 725 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 OR6B3Q8NGW1 331 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 HEXIM2Q96MH2 286 aaKnown RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 ZNF518BQ9C0D4 1074 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 DNAI2Q9GZS0 605 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 MCOLN1Q9GZU1 580 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 CACNG4Q9UBN1 327 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 L1RE1Q9UN81 338 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 CTAGE9A4FU28 777 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 FGFR1P11362 822 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 WARSP23381 471 aaKnown RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 CDH5P33151 784 aaPredicted RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 AARSP49588 968 aaKnown RBP eCLIP14.94□□□□□ -0.02
SPG7-206ENST00000562775 ORC1Q13415 861 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 STILQ15468 1287 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 CNGA2Q16280 664 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 SGO2Q562F6 1265 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 DEFB128Q7Z7B8 93 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 PHF13Q86YI8 300 aaPredicted RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 PASD1Q8IV76 773 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 RHOT2Q8IXI1 618 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 TMEM35BQ8NCS4 154 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 SLC35G2Q8TBE7 412 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 KBTBD7Q8WVZ9 684 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 CPA5Q8WXQ8 436 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 ARHGEF26Q96DR7 871 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 TRIM11Q96F44 468 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 VCPIP1Q96JH7 1222 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 SENP8Q96LD8 212 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 NAPGQ99747 312 aaPredicted RBP14.94□□□□□ -0.02
SPG7-206ENST00000562775 PAAF1Q9BRP4 392 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 LHX5Q9H2C1 402 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 SNX25Q9H3E2 840 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 GTF3C4Q9UKN8 822 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 LRFN2Q9ULH4 789 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 CEP83Q9Y592 693 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 PCDHGC5Q9Y5F6 944 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 BRCA2P51587 3418 aa14.94□□□□□ -0.02
SPG7-206ENST00000562775 A8MXQ7 604 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 KIAA0355O15063 1070 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 HOXA2O43364 376 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 CYP1A2P05177 515 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 MYBL1P10243 752 aa14.93□□□□□ -0.02
SPG7-206ENST00000562775 IGFBP6P24592 240 aaPredicted RBP14.93□□□□□ -0.02
SPG7-206ENST00000562775 GNL1P36915 607 aaPredicted RBP14.93□□□□□ -0.02
SPG7-206ENST00000562775 DSC1Q08554 894 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms