RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 ZNF516Q92618 1163 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 ZSWIM3Q96MP5 696 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 KXD1Q9BQD3 176 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 ZCWPW1Q9H0M4 648 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 AVENQ9NQS1 362 aaPredicted RBP11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 INTS13Q9NVM9 706 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 L1RE1Q9UN81 338 aa11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 MRPS23Q9Y3D9 190 aaKnown RBP11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 ARIH1Q9Y4X5 557 aaPredicted RBP11.96□□□□□ -0.49
LPCAT4-202ENST00000562404 TICRRQ7Z2Z1 1910 aa11.96□□□□□ -0.5
LPCAT4-202ENST00000562404 NUP210Q8TEM1 1887 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 UBE4BO95155 1302 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF233A6NK53 670 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 KIAA0391O15091 583 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 CST3P01034 146 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 KRT19P08727 400 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SRFP11831 508 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 FCARP24071 287 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SYKP43405 635 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 CASP4P49662 377 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 EPHA5P54756 1037 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 GPC5P78333 572 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 CYP24A1Q07973 514 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 TCF15Q12870 199 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SNRNP35Q16560 246 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 KNOP1Q1ED39 458 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SV2CQ496J9 727 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SLC39A12Q504Y0 691 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SUGP1Q8IWZ8 645 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 SIX5Q8N196 739 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 PDCL2Q8N4E4 241 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 FSIP1Q8NA03 581 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 KCTD10Q9H3F6 313 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF334Q9HCZ1 680 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 ITGA11Q9UKX5 1188 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 CA14Q9ULX7 337 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 NME7Q9Y5B8 376 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF638Q14966 1978 aaKnown RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 MIA3Q5JRA6 1907 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 ANAPC1Q9H1A4 1944 aa11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 KIF26AQ9ULI4 1882 aaPredicted RBP11.95□□□□□ -0.5
LPCAT4-202ENST00000562404 A0A1W2PQ27 194 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 A0A1W2PQ64 194 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 A0A1W2PQD8 194 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 TMEM191BP0C7N4 346 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 MYL4P12829 197 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 ATF6P18850 670 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 PAX3P23760 479 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 ACAT1P24752 427 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 DPYDQ12882 1025 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 BFSP1Q12934 665 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 SOWAHAQ2M3V2 549 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 STXBP5Q5T5C0 1151 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 TANGO2Q6ICL3 276 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 KRBA2Q6ZNG9 492 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 C12orf56Q8IXR9 622 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 LRRC52Q8N7C0 313 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 XXYLT1Q8NBI6 393 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 STKLD1Q8NE28 680 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 FLCNQ8NFG4 579 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 SHKBP1Q8TBC3 707 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 CACTINQ8WUQ7 758 aaKnown RBP11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 NXPE3Q969Y0 559 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 ELMO3Q96BJ8 720 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF560Q96MR9 790 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 PHOX2BQ99453 314 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 PKMYT1Q99640 499 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 LPIN3Q9BQK8 851 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 OXCT2Q9BYC2 517 aaPredicted RBP11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 SCAND2PQ9GZW5 306 aaPredicted RBP11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 GDAP2Q9NXN4 497 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 MAFFQ9ULX9 164 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 SNX9Q9Y5X1 595 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 ZFP37Q9Y6Q3 630 aaPredicted RBP11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 CACNA1HO95180 2353 aa11.94□□□□□ -0.5
LPCAT4-202ENST00000562404 USP34Q70CQ2 3546 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF202O95125 648 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 RPN1P04843 607 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 DLATP10515 647 aaKnown RBP11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 GPR15P49685 360 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 RBP5P82980 135 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 NHLH1Q02575 133 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 PSMD6Q15008 389 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 TEAD2Q15562 447 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 FAM78AQ5JUQ0 283 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 GAREM2Q75VX8 874 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 PDZD4Q76G19 769 aaPredicted RBP11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 TRAPPC11Q7Z392 1133 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 LIMS2Q7Z4I7 341 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 METTL23Q86XA0 190 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 GPIHBP1Q8IV16 184 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 WDR49Q8IV35 697 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 KBTBD7Q8WVZ9 684 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 CCDC127Q96BQ5 260 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 FAM122AQ96E09 287 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 ANKRD36BP1Q96IX9 119 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 ZNF512Q96ME7 567 aaPredicted RBP11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 CGRRF1Q99675 332 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 MKNK1Q9BUB5 465 aa11.93□□□□□ -0.5
LPCAT4-202ENST00000562404 SLC2A4RGQ9NR83 387 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms