RNA–Protein interactions for RNA: ENST00000561947.5

SMG1-205, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 2,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-205ENST00000561947 LACTBP83111 547 aaPredicted RBP10.41□□□□□ -0.74
SMG1-205ENST00000561947 MARCH8Q5T0T0 291 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 IQSEC1Q6DN90 963 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 EXD1Q8NHP7 514 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 CXorf38Q8TB03 319 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 PTPN18Q99952 460 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 CAPS2Q9BXY5 557 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 ATP8A1Q9Y2Q0 1164 aa10.41□□□□□ -0.74
SMG1-205ENST00000561947 RALGAPA2Q2PPJ7 1873 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 MED7O43513 233 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 PAEPP09466 180 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 CD19P15391 556 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 ATICP31939 592 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 HNRNPH2P55795 449 aaKnown RBP10.4□□□□□ -0.74
SMG1-205ENST00000561947 TAP1Q03518 808 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 KLF1Q13351 362 aaPredicted RBP10.4□□□□□ -0.74
SMG1-205ENST00000561947 PPP1R7Q15435 360 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 DGKDQ16760 1214 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 SLC10A6Q3KNW5 377 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 WDR72Q3MJ13 1102 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 PPP1R15BQ5SWA1 713 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 DENND1BQ6P3S1 775 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 LRRC31Q6UY01 552 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 KDM7AQ6ZMT4 941 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 ZNF410Q86VK4 478 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 ERICH1Q86X53 443 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 CCDC50Q8IVM0 306 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 C2orf69Q8N8R5 385 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 NPLOC4Q8TAT6 608 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 SCLT1Q96NL6 688 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 FAM129AQ9BZQ8 928 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 DCLK3Q9C098 648 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 SDCBP2Q9H190 292 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 VRTNQ9H8Y1 702 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 CHST7Q9NS84 486 aa10.4□□□□□ -0.74
SMG1-205ENST00000561947 MTRF1LQ9UGC7 380 aaKnown RBP10.4□□□□□ -0.74
SMG1-205ENST00000561947 SLC15A5A6NIM6 579 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 RALAP11233 206 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 SSR1P43307 286 aaKnown RBP10.4□□□□□ -0.75
SMG1-205ENST00000561947 PMS2P54278 862 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 RAD23BP54727 409 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 ZNF252P-AS1Q0IIN9 211 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 SNX1Q13596 522 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 DNAJC21Q5F1R6 531 aaKnown RBP10.4□□□□□ -0.75
SMG1-205ENST00000561947 EMC10Q5UCC4 262 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 RUFY4Q6ZNE9 571 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 SYDE1Q6ZW31 735 aaPredicted RBP10.4□□□□□ -0.75
SMG1-205ENST00000561947 KIAA0319LQ8IZA0 1049 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 TMEM130Q8N3G9 435 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 C3orf20Q8ND61 904 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 ART4Q93070 314 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 MCEEQ96PE7 176 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 LHX5Q9H2C1 402 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 SMYD3Q9H7B4 428 aa10.4□□□□□ -0.75
SMG1-205ENST00000561947 A0A1B0GUA9 196 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 A6NNZ2 444 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 ADCY6O43306 1168 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 CELF2O95319 508 aaKnown RBP10.39□□□□□ -0.75
SMG1-205ENST00000561947 NR1D1P20393 614 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 GJC1P36383 396 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 CDH8P55286 799 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 KRT17Q04695 432 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 TMEM132DQ14C87 1099 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 TUBB8Q3ZCM7 444 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 DCUN1D2Q6PH85 259 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 ILDR2Q71H61 639 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 GRK7Q8WTQ7 553 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 ATG4AQ8WYN0 398 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 OSBPL8Q9BZF1 889 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 EPB41L4BQ9H329 900 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 CYP3A43Q9HB55 503 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 HOMER3Q9NSC5 361 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 CALCOCO1Q9P1Z2 691 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 STRIP2Q9ULQ0 834 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 IVLP07476 585 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 POLR2BP30876 1174 aaKnown RBP10.39□□□□□ -0.75
SMG1-205ENST00000561947 IRAK1P51617 712 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 EIF3BP55884 814 aaKnown RBP10.39□□□□□ -0.75
SMG1-205ENST00000561947 OGDHQ02218 1023 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 PTK6Q13882 451 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 PTPN20Q4JDL3 420 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 CYP4A22Q5TCH4 519 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 AGBL2Q5U5Z8 902 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 LRRC38Q5VT99 294 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 NT5DC4Q86YG4 428 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 PKNOX2Q96KN3 472 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 ACAP3Q96P50 834 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 ADPGKQ9BRR6 497 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 HEMGNQ9BXL5 484 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 PABPC3Q9H361 631 aaKnown RBP10.39□□□□□ -0.75
SMG1-205ENST00000561947 WHRNQ9P202 907 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 R3HDM2Q9Y2K5 976 aaKnown RBP10.39□□□□□ -0.75
SMG1-205ENST00000561947 C2CD2Q9Y426 696 aa10.39□□□□□ -0.75
SMG1-205ENST00000561947 TRIP11Q15643 1979 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 RRN3P2A6NIE6 340 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 CILPO75339 1184 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 NUDT17P0C025 328 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 P4HA1P13674 534 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 CETN2P41208 172 aa10.38□□□□□ -0.75
SMG1-205ENST00000561947 GRM5P41594 1212 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms