RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TTC25Q96NG3 672 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 LRRC27Q9C0I9 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 USP17L3A6NCW0 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 USP17L4A6NCW7 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 PRPF4O43172 522 aaKnown RBP eCLIP19.61■□□□□ 0.73
RAB40C-206ENST00000561781 DNAJC6O75061 913 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 SPAG7O75391 227 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 ZBED1O96006 694 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 EGFRP00533 1210 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 COL6A2P12110 1019 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 ACTR3P61158 418 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 SLC35G1Q2M3R5 365 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 NADK2Q4G0N4 442 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 CIAPIN1Q6FI81 312 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 USP17L1Q7RTZ2 530 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 NEK8Q86SG6 692 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 CCDC110Q8TBZ0 833 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 DNAJC19Q96DA6 116 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 NUDT12Q9BQG2 462 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 OSBPL8Q9BZF1 889 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 NPHS2Q9NP85 383 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 ANKFY1Q9P2R3 1169 aa19.61■□□□□ 0.73
RAB40C-206ENST00000561781 TBC1D12O60347 775 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 CETPP11597 493 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 EIF6P56537 245 aaKnown RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 NAA20P61599 178 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 C16orf87Q6PH81 154 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 RAPH1Q70E73 1250 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 CCDC105Q8IYK2 499 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 SMG5Q9UPR3 1016 aaKnown RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 ZMYM2Q9UBW7 1377 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 POTEMA6NI47 508 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 EIF3FO00303 357 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 DKC1O60832 514 aaKnown RBP eCLIP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 CCR3P51677 355 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 JAM2P57087 298 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 CTTNQ14247 550 aaKnown RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 AAGABQ6PD74 315 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 GLYCTKQ8IVS8 523 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 COX4I2Q96KJ9 171 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 CYTH2Q99418 400 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 MRPS26Q9BYN8 205 aaKnown RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 WHRNQ9P202 907 aa19.6■□□□□ 0.73
RAB40C-206ENST00000561781 ARPP21Q9UBL0 812 aaPredicted RBP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.6■□□□□ 0.73
RAB40C-206ENST00000561781 THAP12O43422 761 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 CYTH3O43739 400 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 CAPN15O75808 1086 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 TMEM253P0C7T8 217 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 GMPSP49915 693 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 ARHGAP4P98171 946 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 GJB7Q6PEY0 223 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 RIPOR1Q6ZS17 1223 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 KRT25Q7Z3Z0 450 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 GIPC3Q8TF64 312 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 ARHGEF26Q96DR7 871 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 KLHL4Q9C0H6 718 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 SUGT1Q9Y2Z0 365 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 NUMBLQ9Y6R0 609 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 DICER1Q9UPY3 1922 aaKnown RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 PCNTO95613 3336 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 ZNF646O15015 1829 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 C15orf38-AP3S2A0A0A6YYH1 394 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 LDHAP00338 332 aaKnown RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 CHKAP35790 457 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 PFKPQ01813 784 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 STAT4Q14765 748 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 ARPINQ7Z6K5 226 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 DZIP1Q86YF9 867 aaKnown RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 SLC30A5Q8TAD4 765 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 OLIG1Q8TAK6 271 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 ZNF384Q8TF68 577 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 KCTD10Q9H3F6 313 aa19.59■□□□□ 0.73
RAB40C-206ENST00000561781 SCAF8Q9UPN6 1271 aaKnown RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 GPC6Q9Y625 555 aaPredicted RBP19.59■□□□□ 0.73
RAB40C-206ENST00000561781 FRMPD4Q14CM0 1322 aa19.58■□□□□ 0.73
RAB40C-206ENST00000561781 TSPY2A6NKD2 308 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 TP73O15350 636 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 PCSK6P29122 969 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 KCNJ1P48048 391 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 MARCKSL1P49006 195 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 SMUG1Q53HV7 270 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 TMPRSS6Q8IU80 811 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 SNX29Q8TEQ0 813 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 FAM172AQ8WUF8 416 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 KRT35Q92764 455 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 BTBD9Q96Q07 612 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 CCT7Q99832 543 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 DRC3Q9H069 523 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 TRPC7Q9HCX4 862 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 DNAJC17Q9NVM6 304 aaKnown RBP19.58■□□□□ 0.72
RAB40C-206ENST00000561781 UBAP1Q9NZ09 502 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 HEY2Q9UBP5 337 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 ADAMTSL1Q8N6G6 1762 aa19.58■□□□□ 0.72
RAB40C-206ENST00000561781 SLC5A2P31639 672 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 TMEM63BQ5T3F8 832 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 STRIP1Q5VSL9 837 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 RFX8Q6ZV50 586 aa19.57■□□□□ 0.72
RAB40C-206ENST00000561781 DHDDSQ86SQ9 333 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms