RNA–Protein interactions for RNA: ENST00000561673.1

CLK3-205, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 639 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-205ENST00000561673 KCNG4Q8TDN1 519 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 SHDQ96IW2 340 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 ASB16Q96NS5 453 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 C7orf25Q9BPX7 421 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 LRRC3Q9BY71 257 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 FOXQ1Q9C009 403 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 ZCWPW1Q9H0M4 648 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 DNAJC25Q9H1X3 360 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 ASAH2Q9NR71 780 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 RBAKQ9NYW8 714 aaPredicted RBP11.11□□□□□ -0.63
CLK3-205ENST00000561673 PCDHA7Q9UN72 937 aa11.11□□□□□ -0.63
CLK3-205ENST00000561673 ZFHX2Q9C0A1 2572 aaPredicted RBP11.11□□□□□ -0.63
CLK3-205ENST00000561673 ITGB3P05106 788 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 GLULP15104 373 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 POLR2BP30876 1174 aaKnown RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 ME1P48163 572 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 ASIC1P78348 528 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 PFKPQ01813 784 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 PLD1Q13393 1074 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 ANGPT1Q15389 498 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 TEAD2Q15562 447 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 MLF2Q15773 248 aaPredicted RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 SV2CQ496J9 727 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 ATL3Q6DD88 541 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 DNAJB7Q7Z6W7 309 aaPredicted RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 LRRTM3Q86VH5 581 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 TMC8Q8IU68 726 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 THEM5Q8N1Q8 247 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 CSGALNACT2Q8N6G5 542 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 C1orf127Q8N9H9 656 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 LEMD2Q8NC56 503 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 PJA1Q8NG27 643 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 SHKBP1Q8TBC3 707 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 NOC3LQ8WTT2 800 aaKnown RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 CACTINQ8WUQ7 758 aaKnown RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 SMARCD2Q92925 531 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 FAM84AQ96KN4 292 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 DDX23Q9BUQ8 820 aaKnown RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 ZFP14Q9HCL3 533 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 PDE11AQ9HCR9 933 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 DLGAP2Q9P1A6 1054 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 HSFX1Q9UBD0 423 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 AGAP1Q9UPQ3 857 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 MTF2Q9Y483 593 aaPredicted RBP11.1□□□□□ -0.63
CLK3-205ENST00000561673 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 CACNA1HO95180 2353 aa11.1□□□□□ -0.63
CLK3-205ENST00000561673 A0A1W2PRU2 124 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 KANSL1LA0AUZ9 987 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 PROB1E7EW31 1015 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 LRRN2O75325 713 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 CD72P21854 359 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 CASP1P29466 404 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 PNPLA4P41247 253 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 NBL1P41271 181 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 VIPR2P41587 438 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 TUFMP49411 452 aaKnown RBP11.09□□□□□ -0.63
CLK3-205ENST00000561673 PRKCQQ04759 706 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 DNM1Q05193 864 aaKnown RBP11.09□□□□□ -0.63
CLK3-205ENST00000561673 GRM2Q14416 872 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 RESP18Q5W5W9 173 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 STXBP4Q6ZWJ1 553 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 EPM2AIP1Q7L775 607 aaPredicted RBP11.09□□□□□ -0.63
CLK3-205ENST00000561673 FRMD5Q7Z6J6 570 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 GPD1LQ8N335 351 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 PDCL2Q8N4E4 241 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 ZSCAN18Q8TBC5 510 aaPredicted RBP11.09□□□□□ -0.63
CLK3-205ENST00000561673 ZNF507Q8TCN5 953 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 PSMG2Q969U7 264 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 ZNF560Q96MR9 790 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 TRPV4Q9HBA0 871 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 SIX4Q9UIU6 781 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 RCOR1Q9UKL0 485 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 ITGA11Q9UKX5 1188 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 CFAP45Q9UL16 551 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 ASB3Q9Y575 518 aa11.09□□□□□ -0.63
CLK3-205ENST00000561673 ZNF233A6NK53 670 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 FAM170BA6NMN3 283 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 KIAA0391O15091 583 aaKnown RBP11.08□□□□□ -0.64
CLK3-205ENST00000561673 EIF3DO15371 548 aaKnown RBP eCLIP11.08□□□□□ -0.64
CLK3-205ENST00000561673 TGFB1I1O43294 461 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 GFRA3O60609 400 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 RBP5P82980 135 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 EHHADHQ08426 723 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 MGAT5BQ3V5L5 792 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 FAM26FQ5R3K3 315 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 STXBP5Q5T5C0 1151 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 LMBRD2Q68DH5 695 aaPredicted RBP11.08□□□□□ -0.64
CLK3-205ENST00000561673 VITQ6UXI7 678 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 UNC13DQ70J99 1090 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 GAREM2Q75VX8 874 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 CBWD2Q8IUF1 395 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 LRRC52Q8N7C0 313 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 SCFD1Q8WVM8 642 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 SEPT5Q99719 369 aaPredicted RBP11.08□□□□□ -0.64
CLK3-205ENST00000561673 LPIN3Q9BQK8 851 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 TRMT61BQ9BVS5 477 aaKnown RBP11.08□□□□□ -0.64
CLK3-205ENST00000561673 MTMR12Q9C0I1 747 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 GPR88Q9GZN0 384 aa11.08□□□□□ -0.64
CLK3-205ENST00000561673 BLZF1Q9H2G9 400 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms