RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 NRKQ7Z2Y5 1582 aa10.67□□□□□ -0.7
GTF3C1-202ENST00000561623 HUS1O60921 280 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 KRT76Q01546 638 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 ZSWIM1Q9BR11 485 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CDC42EP4Q9H3Q1 356 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 EXOSC4Q9NPD3 245 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 IL1RAPL1Q9NZN1 696 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CST8O60676 142 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CENPCQ03188 943 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 RBBP8NLQ8NC74 664 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SYN2Q92777 582 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 ZFYVE19Q96K21 471 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 RXFP1Q9HBX9 757 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 EPB41L4AQ9HCS5 686 aaPredicted RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 BLOC1S6Q9UL45 172 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 AP1G2O75843 785 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CRKP46108 304 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 FAXCQ5TGI0 409 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SCN4BQ8IWT1 228 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 FBXO25Q8TCJ0 367 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 DDX18Q9NVP1 670 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 A8MXQ7 604 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PDGFRAP16234 1089 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 OTUD4Q01804 1114 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SNRNP35Q16560 246 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SMIM5Q71RC9 77 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PPHLN1Q8NEY8 458 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PAWRQ96IZ0 340 aaKnown RBP10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 WNK4Q96J92 1243 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 KLHL4Q9C0H6 718 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PPCSQ9HAB8 311 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SP110Q9HB58 689 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 NAGPAQ9UK23 515 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 GRID1Q9ULK0 1009 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 O00370 1275 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 KRT16P08779 473 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CLEC10AQ8IUN9 316 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 FAM162AQ96A26 154 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 F5H6K3 240 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 CLPTM1O96005 669 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PSMC3P17980 439 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 SULT1E1P49888 294 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 TNFAIP2Q03169 654 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 KLRC3Q07444 240 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 TJAP1Q5JTD0 557 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 WLSQ5T9L3 541 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 MEI1Q5TIA1 1274 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 ISLR2Q6UXK2 745 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 PPIL6Q8IXY8 311 aa10.66□□□□□ -0.7
GTF3C1-202ENST00000561623 C2CD6Q53TS8 623 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 TUFT1Q9NNX1 390 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 IFNA8P32881 189 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 RFC5P40937 340 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 KIZQ2M2Z5 673 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 EDRF1Q3B7T1 1238 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 WDR72Q3MJ13 1102 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 ARHGAP22Q7Z5H3 698 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 CCDC60Q8IWA6 550 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 MICU2Q8IYU8 434 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 WRNIP1Q96S55 665 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 MRPL4Q9BYD3 311 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 C10orf88Q9H8K7 445 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 APPL1Q9UKG1 709 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 F8VZ95 297 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 GHRP10912 638 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 CIITAP33076 1130 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 DEFA1P59665 94 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 DEFA3P59666 94 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 ABCE1P61221 599 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 EPHA7Q15375 998 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 DUOXA2Q1HG44 320 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 CYP4A22Q5TCH4 519 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 IL31Q6EBC2 164 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 PCYOX1LQ8NBM8 494 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 DIS3LQ8TF46 1054 aaKnown RBP10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 DDI1Q8WTU0 396 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 PTPRN2Q92932 1015 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 RNPEPQ9H4A4 650 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 SNX13Q9Y5W8 968 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 PTPN4P29074 926 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 HSPA13P48723 471 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 NT5C2P49902 561 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 MAP3K10Q02779 954 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 ATP1A4Q13733 1029 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 C9orf131Q5VYM1 1079 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 PLEKHA7Q6IQ23 1121 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 C17orf80Q9BSJ5 609 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 CDY2AQ9Y6F7 541 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 CDY1Q9Y6F8 540 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 AK9Q5TCS8 1911 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 ADGRA2Q96PE1 1338 aa10.65□□□□□ -0.7
GTF3C1-202ENST00000561623 ARL4DP49703 201 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 AQP5P55064 265 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 RASA2Q15283 850 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 FUT11Q495W5 492 aa10.65□□□□□ -0.71
GTF3C1-202ENST00000561623 ELOA2Q8IYF1 753 aaPredicted RBP10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms