RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 ATF2P15336 505 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 FSHRP23945 695 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PSMC2P35998 433 aaKnown RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 PIK3CAP42336 1068 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 ALDH1A3P47895 512 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 AARSP49588 968 aaKnown RBP eCLIP10.87□□□□□ -0.67
HERC1-212ENST00000561348 VAMP7P51809 220 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 MYL7Q01449 175 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 TSPY1Q01534 308 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 TWF1Q12792 350 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 ZNF699Q32M78 642 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 MGAT5BQ3V5L5 792 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 DCAF17Q5H9S7 520 aaPredicted RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 ANKRD40Q6AI12 368 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 IQCEQ6IPM2 695 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 C15orf39Q6ZRI6 1047 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 ADGRF2Q8IZF7 708 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PDCL2Q8N4E4 241 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 LRRC52Q8N7C0 313 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 OR6B3Q8NGW1 331 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 OR10T2Q8NGX3 314 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 PARD3BQ8TEW8 1205 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 HDAC7Q8WUI4 952 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 KHSRPQ92945 711 aaKnown RBP eCLIP10.87□□□□□ -0.677e-7■■□□□ 11.6
HERC1-212ENST00000561348 ZNF707Q96C28 371 aaPredicted RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 ZNF512Q96ME7 567 aaPredicted RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 SNX25Q9H3E2 840 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 EPHX3Q9H6B9 360 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 DMAC2Q9NW81 257 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 AFF4Q9UHB7 1163 aaKnown RBP10.87□□□□□ -0.67
HERC1-212ENST00000561348 L1RE1Q9UN81 338 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 TRAF3IP3Q9Y228 551 aa10.87□□□□□ -0.67
HERC1-212ENST00000561348 VCANP13611 3396 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 TTC28Q96AY4 2481 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 CLUHO75153 1309 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 FAM86C2PA6NEL3 165 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 ABLIM3O94929 683 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 HNRNPA1P09651 372 aaKnown RBP eCLIP10.86□□□□□ -0.67
HERC1-212ENST00000561348 PAX3P23760 479 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 RAP1GAPP47736 663 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 GCLMP48507 274 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 PSMC1P62191 440 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 NCOA4Q13772 614 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 UVSSAQ2YD98 709 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 CCDC40Q4G0X9 1142 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 PABPC1LQ4VXU2 614 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 TDRD10Q5VZ19 366 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 TPGS2Q68CL5 300 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 INTS8Q75QN2 995 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 OTOP3Q7RTS5 596 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 SLC9A9Q8IVB4 645 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 DCP1BQ8IZD4 617 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 TTC9BQ8N6N2 239 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 CMASQ8NFW8 434 aaPredicted RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 GPR152Q8TDT2 470 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 GIPC2Q8TF65 315 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 NELFBQ8WX92 580 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 BORCS6Q96GS4 357 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 PI4K2AQ9BTU6 479 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 WDR6Q9NNW5 1121 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 MRPS23Q9Y3D9 190 aaKnown RBP10.86□□□□□ -0.67
HERC1-212ENST00000561348 INSL5Q9Y5Q6 135 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 CUL9Q8IWT3 2517 aa10.86□□□□□ -0.67
HERC1-212ENST00000561348 DOCK6Q96HP0 2047 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 MTMR11A4FU01 709 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 LOC730098B7Z3J9 87 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 DCXO43602 365 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 TBC1D4O60343 1298 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 ATP2C2O75185 946 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 CYP11A1P05108 521 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 CD44P16070 742 aaKnown RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 GJA1P17302 382 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 PTPN2P17706 415 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 PMS1P54277 932 aaKnown RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 EPHB3P54753 998 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 CYP27A1Q02318 531 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 GPR17Q13304 367 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 MYBPC2Q14324 1141 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 SOWAHAQ2M3V2 549 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 ZNF667Q5HYK9 610 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 CYP4A22Q5TCH4 519 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 DPH6Q7L8W6 267 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 LRRTM3Q86VH5 581 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 OSTM1Q86WC4 334 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 SPATA2LQ8IUW3 424 aaPredicted RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 SCN4BQ8IWT1 228 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 TCEAL8Q8IYN2 117 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 HS6ST3Q8IZP7 471 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 ADSSL1Q8N142 457 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 TMEM86AQ8N2M4 240 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 CCDC150Q8NCX0 1101 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 SYAP1Q96A49 352 aaPredicted RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 MCRS1Q96EZ8 462 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 MYADMQ96S97 322 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 MRPL45Q9BRJ2 306 aaKnown RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 OXCT2Q9BYC2 517 aaPredicted RBP10.85□□□□□ -0.67
HERC1-212ENST00000561348 IMPG2Q9BZV3 1241 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 ZCWPW1Q9H0M4 648 aa10.85□□□□□ -0.67
HERC1-212ENST00000561348 NUP62CLQ9H1M0 184 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms