RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 WEE2P0C1S8 567 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 JUPP14923 745 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KCNA2P16389 499 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NPPBP16860 134 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PRKCHP24723 683 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ABCD3P28288 659 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ARL1P40616 181 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 MATR3P43243 847 aaKnown RBP eCLIP2.23□□□□□ -2.05
RTF1-207ENST00000561076 CAPZA2P47755 286 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PIK3CGP48736 1102 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 CTCFP49711 727 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 PRKAA2P54646 552 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 UBXN2AP68543 259 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NOMO3P69849 1222 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 POU6F2P78424 691 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 IFI35P80217 286 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 RBP5P82980 135 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FOXO4P98177 505 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 CYP27A1Q02318 531 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GRIN1Q05586 938 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NSUN2Q08J23 767 aaKnown RBP eCLIP2.23□□□□□ -2.05
RTF1-207ENST00000561076 GALNT2Q10471 571 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 AP1B1Q10567 949 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 AIMP1Q12904 312 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 EPS8Q12929 822 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NFATC3Q12968 1075 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SNAPC2Q13487 334 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 DCTN2Q13561 401 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 ACVR2BQ13705 512 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MOGSQ13724 837 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 TARBP2Q15633 366 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 GRIK5Q16478 980 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MAPKAPK3Q16644 382 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 INSCQ1MX18 579 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 P3H1Q32P28 736 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 HSP90AA5PQ58FG0 334 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 ZNF569Q5MCW4 686 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RTP2Q5QGT7 225 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PRAMEF14Q5SWL7 426 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SLC9C2Q5TAH2 1124 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 DEPDC1Q5TB30 811 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FAXCQ5TGI0 409 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FYB2Q5VWT5 728 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MBLAC2Q68D91 279 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KRT80Q6KB66 452 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FSTL4Q6MZW2 842 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RINT1Q6NUQ1 792 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 CCDC73Q6ZRK6 1079 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 THAP5Q7Z6K1 395 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SLFN11Q7Z7L1 901 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 NLRP14Q86W24 1093 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 RASGRP3Q8IV61 690 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 WDR63Q8IWG1 891 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ULK2Q8IYT8 1036 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ADSSL1Q8N142 457 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PQLC1Q8N2U9 271 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SLC15A4Q8N697 577 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GLIS1Q8NBF1 620 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 C2CD4AQ8NCU7 369 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 DDX55Q8NHQ9 600 aaKnown RBP eCLIP2.23□□□□□ -2.05
RTF1-207ENST00000561076 PSMA8Q8TAA3 256 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GABPB2Q8TAK5 448 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 SETD6Q8TBK2 473 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 CPT1CQ8TCG5 803 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 STT3BQ8TCJ2 826 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KCNG4Q8TDN1 519 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SCFD2Q8WU76 684 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FBLIM1Q8WUP2 373 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 HSPH1Q92598 858 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KCNN1Q92952 543 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SNX21Q969T3 373 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SPSB4Q96A44 273 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 TRIM43Q96BQ3 446 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 SAAL1Q96ER3 474 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SIPA1Q96FS4 1042 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 APOPT1Q96IL0 206 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 TRIM47Q96LD4 638 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SAMD11Q96NU1 681 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 MOGAT1Q96PD6 335 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 FNBP1Q96RU3 617 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PIGSQ96S52 555 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 EIF3CQ99613 913 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 PDCD2LQ9BRP1 358 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GPATCH1Q9BRR8 931 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 DESI2Q9BSY9 194 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ACAT2Q9BWD1 397 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PACSIN1Q9BY11 444 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 GPR62Q9BZJ7 368 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 DNAI2Q9GZS0 605 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SIK2Q9H0K1 926 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ZCWPW1Q9H0M4 648 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PCDHAC1Q9H158 963 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 PABPC3Q9H361 631 aaKnown RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 EPS8L2Q9H6S3 715 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 SH2D4AQ9H788 454 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 KAT14Q9H8E8 782 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 COPS7BQ9H9Q2 264 aaPredicted RBP2.23□□□□□ -2.05
RTF1-207ENST00000561076 SENP2Q9HC62 589 aa2.23□□□□□ -2.05
RTF1-207ENST00000561076 ERVK-5Q9HDB9 667 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms