RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 ZNF334Q9HCZ1 680 aaPredicted RBP17.23■□□□□ 0.35
LMX1B-204ENST00000561065 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 CFAP54Q96N23 3096 aa17.23■□□□□ 0.35
LMX1B-204ENST00000561065 FANCMQ8IYD8 2048 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 CYB561D2O14569 222 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 POLR2DO15514 142 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 EXTL3O43909 919 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 LDHAP00338 332 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 ITGB3P05106 788 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 DCNP07585 359 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 MYL4P12829 197 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 POLR2BP30876 1174 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 STARD6P59095 220 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 TFAMQ00059 246 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 SNW1Q13573 536 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 TEAD2Q15562 447 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 RESP18Q5W5W9 173 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 LMBRD2Q68DH5 695 aaPredicted RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 ARMCX5Q6P1M9 558 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 NT5DC4Q86YG4 428 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 PJA1Q8NG27 643 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 ZNF512Q96ME7 567 aaPredicted RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 ASB16Q96NS5 453 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 DDX23Q9BUQ8 820 aaKnown RBP17.22■□□□□ 0.35
LMX1B-204ENST00000561065 MTMR12Q9C0I1 747 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 PDE11AQ9HCR9 933 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 ASAH2Q9NR71 780 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 SIX4Q9UIU6 781 aa17.22■□□□□ 0.35
LMX1B-204ENST00000561065 SHISA7A6NL88 538 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 KPNA7A9QM74 516 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 MICAL2O94851 1124 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 ATF6P18850 670 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 CMA1P23946 247 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 GRM2Q14416 872 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 MLF2Q15773 248 aaPredicted RBP17.21■□□□□ 0.35
LMX1B-204ENST00000561065 SV2CQ496J9 727 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 SLC39A12Q504Y0 691 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 STXBP5Q5T5C0 1151 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 CYP4A22Q5TCH4 519 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 IQCEQ6IPM2 695 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 LRRTM3Q86VH5 581 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 CBWD2Q8IUF1 395 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 ELMOD1Q8N336 334 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 NOC3LQ8WTT2 800 aaKnown RBP17.21■□□□□ 0.35
LMX1B-204ENST00000561065 ELSPBP1Q96BH3 223 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 ZNF560Q96MR9 790 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 C7orf25Q9BPX7 421 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 MKNK1Q9BUB5 465 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 BLZF1Q9H2G9 400 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 PTPRDP23468 1912 aa17.21■□□□□ 0.35
LMX1B-204ENST00000561065 GOLGA6L4A6NEF3 574 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 STK25O00506 426 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 ZNF197O14709 1029 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 KIAA0391O15091 583 aaKnown RBP17.21■□□□□ 0.34
LMX1B-204ENST00000561065 EIF3DO15371 548 aaKnown RBP eCLIP17.21■□□□□ 0.34
LMX1B-204ENST00000561065 TGFB1I1O43294 461 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 MYL1P05976 194 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 RFX1P22670 979 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 ANGPT1Q15389 498 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 CCDC142Q17RM4 750 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 FAM26FQ5R3K3 315 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 VITQ6UXI7 678 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 GRAMD1CQ8IYS0 662 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 CCDC47Q96A33 483 aaKnown RBP17.21■□□□□ 0.34
LMX1B-204ENST00000561065 RSPRY1Q96DX4 576 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 LPIN3Q9BQK8 851 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 TMLHEQ9NVH6 421 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 DSEQ9UL01 958 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 L1RE1Q9UN81 338 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 ZDHHC9Q9Y397 364 aa17.21■□□□□ 0.34
LMX1B-204ENST00000561065 MTF2Q9Y483 593 aaPredicted RBP17.21■□□□□ 0.34
LMX1B-204ENST00000561065 ZFHX2Q9C0A1 2572 aaPredicted RBP17.21■□□□□ 0.34
LMX1B-204ENST00000561065 CACNA1IQ9P0X4 2223 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 A0A1W2PRU2 124 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 HCRTO43612 131 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 NBL1P41271 181 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 VIPR2P41587 438 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 PLD1Q13393 1074 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 CUL4BQ13620 913 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 SLC44A4Q53GD3 710 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 UNC13DQ70J99 1090 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 GAREM2Q75VX8 874 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 OSTM1Q86WC4 334 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 PDCL2Q8N4E4 241 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 LEMD2Q8NC56 503 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 OR5B17Q8NGF7 314 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 ZSCAN18Q8TBC5 510 aaPredicted RBP17.2■□□□□ 0.34
LMX1B-204ENST00000561065 LEO1Q8WVC0 666 aaPredicted RBP17.2■□□□□ 0.34
LMX1B-204ENST00000561065 SCFD1Q8WVM8 642 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 SMARCD2Q92925 531 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 PSMG2Q969U7 264 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 SEPT5Q99719 369 aaPredicted RBP17.2■□□□□ 0.34
LMX1B-204ENST00000561065 IRF2BPLQ9H1B7 796 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 HSPBP1Q9NZL4 362 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 AGAP1Q9UPQ3 857 aa17.2■□□□□ 0.34
LMX1B-204ENST00000561065 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.19■□□□□ 0.34
LMX1B-204ENST00000561065 PVALEFA0A1B0GWK0 134 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 PROB1E7EW31 1015 aa17.19■□□□□ 0.34
LMX1B-204ENST00000561065 TULP1O00294 542 aaPredicted RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms