RNA–Protein interactions for RNA: ENST00000560730.5

USP8-212, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,449 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-212ENST00000560730 N4BP1O75113 896 aaKnown RBP12.99□□□□□ -0.33
USP8-212ENST00000560730 C4BPAP04003 597 aaKnown RBP12.99□□□□□ -0.33
USP8-212ENST00000560730 HNRNPA1P09651 372 aaKnown RBP eCLIP12.99□□□□□ -0.33
USP8-212ENST00000560730 RPL13P26373 211 aaKnown RBP12.99□□□□□ -0.33
USP8-212ENST00000560730 ELF1P32519 619 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 MYL6P60660 151 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 GPR17Q13304 367 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 CCDC149Q6ZUS6 474 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 LIMS2Q7Z4I7 341 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 RNF135Q8IUD6 432 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 FAM186BQ8IYM0 893 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 TCEAL8Q8IYN2 117 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 TTC9BQ8N6N2 239 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 ATAD1Q8NBU5 361 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 ZCWPW1Q9H0M4 648 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 XYLT2Q9H1B5 865 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 PIDD1Q9HB75 910 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 WDR6Q9NNW5 1121 aaKnown RBP12.99□□□□□ -0.33
USP8-212ENST00000560730 HCFC1R1Q9NWW0 138 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 POLIQ9UNA4 740 aa12.99□□□□□ -0.33
USP8-212ENST00000560730 CLUHO75153 1309 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 MAPK13O15264 365 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 PHACTR2O75167 634 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 TRIM49P0CI25 452 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 TRIM49CP0CI26 452 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 HOXA9P31269 272 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 PSMC2P35998 433 aaKnown RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 VAMP7P51809 220 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 MYO1EQ12965 1108 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 BIRC3Q13489 604 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 SLC39A12Q504Y0 691 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 KLHL10Q6JEL2 608 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 CYP26C1Q6V0L0 522 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 GRASPQ7Z6J2 395 aaPredicted RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 THEM5Q8N1Q8 247 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 KBTBD7Q8WVZ9 684 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 DUSP9Q99956 384 aaKnown RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 OXCT2Q9BYC2 517 aaPredicted RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 GTPBP4Q9BZE4 634 aaKnown RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 CLSTN2Q9H4D0 955 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 TMLHEQ9NVH6 421 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 KIAA1468Q9P260 1216 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 DNMT3BQ9UBC3 853 aaKnown RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
USP8-212ENST00000560730 INSL5Q9Y5Q6 135 aa12.98□□□□□ -0.33
USP8-212ENST00000560730 MTMR11A4FU01 709 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 GABRDO14764 452 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 SOAT2O75908 522 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 ACAT1P24752 427 aaKnown RBP12.97□□□□□ -0.33
USP8-212ENST00000560730 CCNE1P24864 410 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 PPP3CAQ08209 521 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 DUSP4Q13115 394 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 TRPC3Q13507 836 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 CCDC142Q17RM4 750 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 WDR72Q3MJ13 1102 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 ZACNQ401N2 412 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 SV2AQ7L0J3 742 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 ZC3H3Q8IXZ2 948 aaKnown RBP12.97□□□□□ -0.33
USP8-212ENST00000560730 ADGRF2Q8IZF7 708 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 TMEM86AQ8N2M4 240 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 TOP6BLQ8N6T0 577 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 DHTKD1Q96HY7 919 aaPredicted RBP12.97□□□□□ -0.33
USP8-212ENST00000560730 MYADMQ96S97 322 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 EPHX3Q9H6B9 360 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 DDX43Q9NXZ2 648 aaKnown RBP12.97□□□□□ -0.33
USP8-212ENST00000560730 CEP72Q9P209 647 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 NR2E1Q9Y466 385 aa12.97□□□□□ -0.33
USP8-212ENST00000560730 NRG2O14511 850 aaPredicted RBP12.96□□□□□ -0.33
USP8-212ENST00000560730 PSMA7O14818 248 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 IKBKBO14920 756 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 CETN3O15182 167 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 XYLBO75191 536 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 LMO2P25791 158 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 GCLMP48507 274 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 AP3M2P53677 418 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 MCCD1P59942 119 aaPredicted RBP12.96□□□□□ -0.33
USP8-212ENST00000560730 TWF1Q12792 350 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 NCOA4Q13772 614 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 TTI2Q6NXR4 508 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 INTS8Q75QN2 995 aaKnown RBP12.96□□□□□ -0.33
USP8-212ENST00000560730 RTL10Q7L3V2 364 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 ITFG1Q8TB96 612 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 NELFBQ8WX92 580 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 MMS19Q96T76 1030 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 TSG101Q99816 390 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 MRPL45Q9BRJ2 306 aaKnown RBP12.96□□□□□ -0.33
USP8-212ENST00000560730 MMRN2Q9H8L6 949 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
USP8-212ENST00000560730 LIMD1Q9UGP4 676 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 MUTYHQ9UIF7 546 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 MAFFQ9ULX9 164 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 CTNND2Q9UQB3 1225 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 YIPF1Q9Y548 306 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 NME7Q9Y5B8 376 aa12.96□□□□□ -0.33
USP8-212ENST00000560730 ATP2C2O75185 946 aa12.96□□□□□ -0.34
USP8-212ENST00000560730 LRRN2O75325 713 aa12.96□□□□□ -0.34
USP8-212ENST00000560730 STAU1O95793 577 aaKnown RBP12.96□□□□□ -0.34
USP8-212ENST00000560730 HLA-DRAP01903 254 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms