RNA–Protein interactions for RNA: ENST00000560709.1

AC087878.1-201, humanhuman

TSL 4 BASIC

Gene AC087878.1, Length 574 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087878.1-201ENST00000560709 PACSIN1Q9BY11 444 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 IRX2Q9BZI1 471 aaPredicted RBP12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 HIPK3Q9H422 1215 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 TMEM161AQ9NX61 479 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 STRIP2Q9ULQ0 834 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 MRFAP1Q9Y605 127 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 SAR1BQ9Y6B6 198 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 CAPN6Q9Y6Q1 641 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 SCINQ9Y6U3 715 aa12.6□□□□□ -0.39
AC087878.1-201ENST00000560709 TMCO5BA8MYB1 307 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 PODXLO00592 558 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 HUS1O60921 280 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 KIF4AO95239 1232 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 MOCS3O95396 460 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 CXCL10P02778 98 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 CYP1A2P05177 515 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 CD19P15391 556 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 ABCB4P21439 1286 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 RAD23BP54727 409 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 SNX16P57768 344 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 TUSC3Q13454 348 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 SGO2Q562F6 1265 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 C11orf63Q6NUN7 778 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 GSTCDQ8NEC7 633 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 TNIP3Q96KP6 325 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 TMEM106CQ9BVX2 250 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 THAP2Q9H0W7 228 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 C11orf49Q9H6J7 331 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 MRPL47Q9HD33 250 aaKnown RBP12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 DSEQ9UL01 958 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 DUSP10Q9Y6W6 482 aa12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 PDCD11Q14690 1871 aaKnown RBP12.59□□□□□ -0.39
AC087878.1-201ENST00000560709 EFCAB8A8MWE9 144 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 CES2O00748 559 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 BUB1O43683 1085 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ABL1P00519 1130 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 MYCP01106 439 aaPredicted RBP12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 TUBBP07437 444 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SETSIPP0DME0 302 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 WARSP23381 471 aaKnown RBP12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 MNX1P50219 401 aaPredicted RBP12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SCNN1GP51170 649 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 NDST1P52848 882 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 LBX1P52954 281 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 GSCP56915 257 aaPredicted RBP12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 LILRA4P59901 499 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 TAP1Q03518 808 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SOX4Q06945 474 aaPredicted RBP12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 CNGA2Q16280 664 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 NAA35Q5VZE5 725 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ARHGAP17Q68EM7 881 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 PALB2Q86YC2 1186 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 MCOLN2Q8IZK6 566 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SLC4A11Q8NBS3 891 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 TPCN2Q8NHX9 752 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 UBXN4Q92575 508 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ELMO3Q96BJ8 720 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ZNF653Q96CK0 615 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ZFP42Q96MM3 310 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SDCBP2Q9H190 292 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 SNX25Q9H3E2 840 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 ACP6Q9NPH0 428 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 TAS2R14Q9NYV8 317 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 CTTNBP2NLQ9P2B4 639 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 WDR35Q9P2L0 1181 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 TFR2Q9UP52 801 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 HYOU1Q9Y4L1 999 aa12.58□□□□□ -0.4
AC087878.1-201ENST00000560709 GRID2IPA4D2P6 1211 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 CARNS1A5YM72 827 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 TMEM189-UBE2V1I3L0A0 370 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 NBNO60934 754 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 PALMO75781 387 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 HSPA1AP0DMV8 641 aaKnown RBP12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 HSPA1BP0DMV9 641 aaKnown RBP12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 MMP8P22894 467 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 RAP1GAPP47736 663 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 LHX1P48742 406 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 AARSP49588 968 aaKnown RBP eCLIP12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 AMPD2Q01433 879 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 FAAP100Q0VG06 881 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 UPP1Q16831 310 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 SOWAHAQ2M3V2 549 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 TRIM60Q495X7 471 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 ZNF394Q53GI3 561 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 SCARA3Q6AZY7 606 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 LCLAT1Q6UWP7 414 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 MON1BQ7L1V2 547 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 NECAB2Q7Z6G3 386 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 SLFN11Q7Z7L1 901 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 ADGRF2Q8IZF7 708 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 ABI1Q8IZP0 508 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 CRYBG2Q8N1P7 616 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 LRRC57Q8N9N7 239 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 RNF169Q8NCN4 708 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 SLC35G2Q8TBE7 412 aa12.57□□□□□ -0.4
AC087878.1-201ENST00000560709 LPPQ93052 612 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms