RNA–Protein interactions for RNA: ENST00000560492.1

CDC42BPB-207, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-207ENST00000560492 TSC2P49815 1807 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 MYBPHLA2RUH7 354 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 PP2D1A8MPX8 630 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ARNTLO00327 626 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 TOM1L1O75674 476 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 FGF19O95750 216 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 HOXC13P31276 330 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 GUCY2FP51841 1108 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 MLLT6P55198 1093 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 FCHO2Q0JRZ9 810 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 SLC10A6Q3KNW5 377 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ITPRIPL2Q3MIP1 535 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 MGAT5BQ3V5L5 792 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ARSIQ5FYB1 569 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 N4BP2L1Q5TBK1 243 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ERICH6BQ5W0A0 696 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 CACNA2D4Q7Z3S7 1137 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 TMC8Q8IU68 726 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ATAD1Q8NBU5 361 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 BPIFB1Q8TDL5 484 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 CDK5RAP3Q96JB5 506 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 OXCT2Q9BYC2 517 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 DNAJC25Q9H1X3 360 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 FOXP1Q9H334 677 aaPredicted RBP11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 CRISPLD1Q9H336 500 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 SMOC1Q9H4F8 434 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 C2orf42Q9NWW7 574 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 UBQLN1Q9UMX0 589 aaKnown RBP11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 ASB3Q9Y575 518 aa11.4□□□□□ -0.58
CDC42BPB-207ENST00000560492 DENND4CQ5VZ89 1909 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 MTMR11A4FU01 709 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 EXTL3O43909 919 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 PAPSS2O95340 614 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 CLTAP09496 248 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 ODC1P11926 461 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 PROZP22891 400 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 CDC25AP30304 524 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 LIG4P49917 911 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 PLCB2Q00722 1185 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 GRSF1Q12849 480 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 GPR17Q13304 367 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 STPG1Q5TH74 334 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 RINT1Q6NUQ1 792 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 DNAJB7Q7Z6W7 309 aaPredicted RBP11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 KBTBD6Q86V97 674 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 DAW1Q8N136 415 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 TTC9BQ8N6N2 239 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 GIPC2Q8TF65 315 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 GAB3Q8WWW8 586 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 PSMG2Q969U7 264 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 TMEM209Q96SK2 561 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 PLIN2Q99541 437 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 LPIN3Q9BQK8 851 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 SMG9Q9H0W8 520 aaKnown RBP11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 C17orf75Q9HAS0 396 aa11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 RALYQ9UKM9 306 aaKnown RBP11.39□□□□□ -0.59
CDC42BPB-207ENST00000560492 CNOT1A5YKK6 2376 aaKnown RBP11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 C2orf72A6NCS6 295 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 M0QZQ0 153 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 ABLIM1O14639 778 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 ATG13O75143 517 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 OAZ2O95190 189 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 EPN2O95208 641 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 PRAMEF12O95522 483 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 CDC25CP30307 473 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 MPLP40238 635 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 TNFSF9P41273 254 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 MCM2P49736 904 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 BFSP1Q12934 665 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 MAPK7Q13164 816 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 PSMD2Q13200 908 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 MYBPC2Q14324 1141 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 PDIA5Q14554 519 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 SLC39A12Q504Y0 691 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 WDR44Q5JSH3 913 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 RNF43Q68DV7 783 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 CENPPQ6IPU0 288 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 CC2D1AQ6P1N0 951 aaPredicted RBP11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 GAREM2Q75VX8 874 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 METTL23Q86XA0 190 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 SYNPOQ8N3V7 929 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 BEST2Q8NFU1 509 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 TIPINQ9BVW5 301 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 LRRC3Q9BY71 257 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 TASP1Q9H6P5 420 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 RPF1Q9H9Y2 349 aaKnown RBP11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 PLEKHA5Q9HAU0 1116 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 GKN1Q9NS71 199 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 RXFP3Q9NSD7 469 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 OBSL1O75147 1896 aa11.38□□□□□ -0.59
CDC42BPB-207ENST00000560492 CFAP47Q6ZTR5 3102 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 LACTBL1A8MY62 500 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 HNRNPDLO14979 420 aaKnown RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 MEFVO15553 781 aaPredicted RBP11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 VNN2O95498 520 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 PLS3P13797 630 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 LRPAP1P30533 357 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 GBP1P32455 592 aa11.37□□□□□ -0.59
CDC42BPB-207ENST00000560492 AVPR1AP37288 418 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms