RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 ITGB6P18564 788 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 GNAT2P19087 354 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 DRD1P21728 446 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 MZF1P28698 734 aaPredicted RBP7.23□□□□□ -1.25
HERC1-208ENST00000560462 GNA15P30679 374 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 DCTP40126 519 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 CCR2P41597 374 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 SLC26A2P50443 739 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 PPARAQ07869 468 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 PSMD5Q16401 504 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 RTP2Q5QGT7 225 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 CYP4A22Q5TCH4 519 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 INO80CQ6PI98 192 aaPredicted RBP7.23□□□□□ -1.25
HERC1-208ENST00000560462 DHX40Q8IX18 779 aaKnown RBP7.23□□□□□ -1.25
HERC1-208ENST00000560462 MMP21Q8N119 569 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 FRMD1Q8N878 549 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 KCNE4Q8WWG9 221 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 KCTD12Q96CX2 325 aaKnown RBP7.23□□□□□ -1.25
HERC1-208ENST00000560462 CDHR1Q96JP9 859 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 MAP7D2Q96T17 732 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 COLEC11Q9BWP8 271 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 RSAD1Q9HA92 442 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 ADAM28Q9UKQ2 775 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 AKT3Q9Y243 479 aa7.23□□□□□ -1.25
HERC1-208ENST00000560462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP7.23□□□□□ -1.25
HERC1-208ENST00000560462 BSNQ9UPA5 3926 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 NBEAL1Q6ZS30 2694 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 GON4LQ3T8J9 2241 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 VPS37CA5D8V6 355 aaPredicted RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 ADAM12O43184 909 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 ALDH1A2O94788 518 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 C22orf31O95567 290 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 STAU1O95793 577 aaKnown RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 C8BP07358 591 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 ZNF883P0CG24 379 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 GRM5P41594 1212 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 CLCN3P51790 818 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 CLDN6P56747 220 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 SKOR1P84550 965 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 RPL6Q02878 288 aaKnown RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 ZNF33AQ06730 810 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 GRIK2Q13002 908 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 BYSLQ13895 437 aaKnown RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 ZNF484Q5JVG2 852 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 USP49Q70CQ1 688 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 IFNL3Q8IZI9 196 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 DEFB119Q8N690 84 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 ENGASEQ8NFI3 743 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 ZNF668Q96K58 619 aaPredicted RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 DPH1Q9BZG8 443 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 NACAP1Q9BZK3 213 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 GPR88Q9GZN0 384 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 EPN3Q9H201 632 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 CCSER2Q9H7U1 834 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 JPH1Q9HDC5 661 aaPredicted RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 TM7SF3Q9NS93 570 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 CUEDC1Q9NWM3 386 aaPredicted RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 PKD2L1Q9P0L9 805 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 PIN4Q9Y237 131 aaKnown RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 CNTNAP2Q9UHC6 1331 aa7.22□□□□□ -1.25
HERC1-208ENST00000560462 ANKHD1Q8IWZ3 2542 aaKnown RBP7.22□□□□□ -1.25
HERC1-208ENST00000560462 A1L4Q6 167 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 ZBTB42B2RXF5 422 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 CSDE1O75534 798 aaKnown RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 AGFG2O95081 481 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 OR1D2P34982 312 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 RPIAP49247 311 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 DSC1Q08554 894 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 SPIRE1Q08AE8 756 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 NR5A1Q13285 461 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 GNL2Q13823 731 aaKnown RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 RAB33AQ14088 237 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 TEAD4Q15561 434 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 PCNX4Q63HM2 1172 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 CEP57Q86XR8 500 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 CCDC116Q8IYX3 515 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 LNX1Q8TBB1 728 aaPredicted RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 SSH3Q8TE77 659 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 GPRASP2Q96D09 838 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 TTPALQ9BTX7 342 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.21□□□□□ -1.26
HERC1-208ENST00000560462 API5Q9BZZ5 524 aaKnown RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 LRRCC1Q9C099 1032 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 NIF3L1Q9GZT8 377 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 FAM124BQ9H5Z6 455 aaPredicted RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 IL21RQ9HBE5 538 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 VAT1LQ9HCJ6 419 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 FBRSL1Q9HCM7 1045 aaKnown RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 SUSD2Q9UGT4 822 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.21□□□□□ -1.26
HERC1-208ENST00000560462 NOP58Q9Y2X3 529 aaKnown RBP7.21□□□□□ -1.26
HERC1-208ENST00000560462 PCDHB2Q9Y5E7 798 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 NBASA2RRP1 2371 aa7.21□□□□□ -1.26
HERC1-208ENST00000560462 SF3B1O75533 1304 aaKnown RBP eCLIP7.21□□□□□ -1.261e-7■■■■■ 51.7
HERC1-208ENST00000560462 KNTC1P50748 2209 aa7.2□□□□□ -1.26
HERC1-208ENST00000560462 PNMA6FA0A0J9YX94 578 aa7.2□□□□□ -1.26
HERC1-208ENST00000560462 ESYT2A0FGR8 921 aa7.2□□□□□ -1.26
HERC1-208ENST00000560462 ZBTB39O15060 712 aa7.2□□□□□ -1.26
HERC1-208ENST00000560462 CILPO75339 1184 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms