RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 HDDC3Q8N4P3 179 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 MCPH1Q8NEM0 835 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 DEPTORQ8TB45 409 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 LEO1Q8WVC0 666 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-215ENST00000560424 PIGKQ92643 395 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 ACDQ96AP0 544 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 PPP1R10Q96QC0 940 aaKnown RBP10.13□□□□□ -0.79
SMAD3-215ENST00000560424 CCDC94Q9BW85 323 aaPredicted RBP10.13□□□□□ -0.79
SMAD3-215ENST00000560424 CXCL16Q9H2A7 254 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 FZD8Q9H461 694 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.13□□□□□ -0.79
SMAD3-215ENST00000560424 GJB4Q9NTQ9 266 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 GPSM3Q9Y4H4 160 aa10.13□□□□□ -0.79
SMAD3-215ENST00000560424 SPAARA0A1B0GVQ0 90 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 BTBD18B2RXH4 712 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 PATE3B3GLJ2 98 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 CDX4O14627 284 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 SLITRK3O94933 977 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 ATP2B1P20020 1258 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 DRD1P21728 446 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 IGFBP6P24592 240 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 DHPSP49366 369 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 RARRES1P49788 294 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 TAF12Q16514 161 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 FBXO43Q4G163 708 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 TMEM196Q5HYL7 178 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 STXBP5Q5T5C0 1151 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 PMS2CLQ68D20 193 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 CDCA2Q69YH5 1023 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 FSTL4Q6MZW2 842 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 CC2D1AQ6P1N0 951 aaPredicted RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 FAM173BQ6P4H8 233 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 RNF19BQ6ZMZ0 732 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 LINC00301Q8NCQ3 95 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 TSTD1Q8NFU3 115 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 RPLP0P6Q8NHW5 317 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 SPATA32Q96LK8 384 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 PGLYRP2Q96PD5 576 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 USP28Q96RU2 1077 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 EIF2AK1Q9BQI3 630 aaKnown RBP10.12□□□□□ -0.79
SMAD3-215ENST00000560424 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 EML5Q05BV3 1969 aa10.12□□□□□ -0.79
SMAD3-215ENST00000560424 NUP205Q92621 2012 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 KIF26AQ9ULI4 1882 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-215ENST00000560424 SMIM28A0A1B0GU29 152 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 ACKR2O00590 384 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 PPP6R2O75170 966 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 BMP15O95972 392 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 EGFP01133 1207 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 GABRR2P28476 465 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 IRX4P78413 519 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 YWHAHQ04917 246 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-215ENST00000560424 RUNX3Q13761 415 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 GNL2Q13823 731 aaKnown RBP10.11□□□□□ -0.79
SMAD3-215ENST00000560424 DMC1Q14565 340 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 TRIM61Q5EBN2 209 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 CD300LGQ6UXG3 332 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 SYT13Q7L8C5 426 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 ITIH5Q86UX2 942 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 CCDC26Q8TAB7 109 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 PIGOQ8TEQ8 1089 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 DDX12PQ92771 950 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 TPSD1Q9BZJ3 242 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 CCDC86Q9H6F5 360 aaKnown RBP10.11□□□□□ -0.79
SMAD3-215ENST00000560424 GKN1Q9NS71 199 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 POLR3BQ9NW08 1133 aaPredicted RBP10.11□□□□□ -0.79
SMAD3-215ENST00000560424 EBF1Q9UH73 591 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 KCNJ14Q9UNX9 436 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 INVSQ9Y283 1065 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 ASB3Q9Y575 518 aa10.11□□□□□ -0.79
SMAD3-215ENST00000560424 NUP210Q8TEM1 1887 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 ATG2BQ96BY7 2078 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 A0A1W2PQ27 194 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 A0A1W2PQ64 194 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 A0A1W2PQD8 194 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 TTLL13PA6NNM8 815 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 TRDMT1O14717 391 aaKnown RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 MAP3K13O43283 966 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 LYPLA2O95372 231 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 CDC25CP30307 473 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 RPL9P32969 192 aaKnown RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 AVPR1AP37288 418 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 OSTNP61366 133 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 SCAPQ12770 1279 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 BFSP1Q12934 665 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 DUSP4Q13115 394 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 ORC2Q13416 577 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 MRPL58Q14197 206 aaKnown RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 VEPH1Q14D04 833 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 SLC39A14Q15043 492 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 PPP2R5AQ15172 486 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 ZNF423Q2M1K9 1284 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 ATF7IP2Q5U623 682 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 EEF1DP3Q658K8 133 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 LMBRD2Q68DH5 695 aaPredicted RBP10.1□□□□□ -0.79
SMAD3-215ENST00000560424 USP37Q86T82 979 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 TTC30AQ86WT1 665 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 TMC8Q8IU68 726 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 CHCHD4Q8N4Q1 142 aa10.1□□□□□ -0.79
SMAD3-215ENST00000560424 GPT2Q8TD30 523 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms