RNA–Protein interactions for RNA: ENST00000560369.5

LRRC49-223, Transcript of leucine rich repeat containing 49, human

APPRIS ALT1 TSL 2 BASIC

Gene LRRC49, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-223	ENST00000560369	EMC1	Q8N766	993 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	C12orf50	Q8NA57	414 aa	Predicted RBP	6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	LRRN4	Q8WUT4	740 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	VTI1A	Q96AJ9	217 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	OPTN	Q96CV9	577 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	CDCA5	Q96FF9	252 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	NAP1L3	Q99457	506 aa	Predicted RBP	6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	LPIN3	Q9BQK8	851 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	OSBPL7	Q9BZF2	842 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	TMEM134	Q9H6X4	195 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	SMYD3	Q9H7B4	428 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	AVEN	Q9NQS1	362 aa	Predicted RBP	6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	NRBP2	Q9NSY0	501 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	ASIC3	Q9UHC3	531 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	DDX20	Q9UHI6	824 aa	Known RBP	6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	CPSF3	Q9UKF6	684 aa	Known RBP	6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	DNPEP	Q9ULA0	475 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	CNTN6	Q9UQ52	1028 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	NEU2	Q9Y3R4	380 aa		6.12	□□□□□ -1.43
LRRC49-223	ENST00000560369	LAMA3	Q16787	3333 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DNAJC25-GNG10	A0A024R161	153 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	GOLGA6L10	A6NI86	522 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	NOP56	O00567	594 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TOM1L1	O75674	476 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	ECEL1	O95672	775 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	KRT19	P08727	400 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	CD48	P09326	243 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TXN	P10599	105 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MMP8	P22894	467 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	RFC1	P35251	1148 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	IFNAR2	P48551	515 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DRG2	P55039	364 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MPP2	Q14168	576 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	FASTKD3	Q14CZ7	662 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	LRRC14	Q15048	493 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	E2F5	Q15329	346 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SH3PXD2A	Q5TCZ1	1133 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DENND2C	Q68D51	928 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MAMDC4	Q6UXC1	1216 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	CAPN12	Q6ZSI9	719 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MICALCL	Q6ZW33	695 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	PHF13	Q86YI8	300 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SULF1	Q8IWU6	871 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DGCR8	Q8WYQ5	773 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DCPS	Q96C86	337 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	PIWIL1	Q96J94	861 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	C9orf72	Q96LT7	481 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SCLT1	Q96NL6	688 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SELENOS	Q9BQE4	189 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	OSBPL8	Q9BZF1	889 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	IFT122	Q9HBG6	1241 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	PTPRH	Q9HD43	1115 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SLTM	Q9NWH9	1034 aa	Known RBP eCLIP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SUFU	Q9UMX1	484 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369		A0A087WZ62	844 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	IGKV6-21	A0A0C4DH24	114 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	GOLGA6L7	A0A1B0GV03	622 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TMEM191C	A6NGB0	347 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	ADCY6	O43306	1168 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	HCRT	O43612	131 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TRAPPC3	O43617	180 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	RASSF9	O75901	435 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	GH1	P01241	217 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	NUDT17	P0C025	328 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TMEM191B	P0C7N4	346 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	ATF7	P17544	494 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	IL1R2	P27930	398 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	RDX	P35241	583 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	RFC5	P40937	340 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DYNLT1	P63172	113 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MBTD1	Q05BQ5	628 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TMEM62	Q0P6H9	643 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MTMR3	Q13615	1198 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	NEDD9	Q14511	834 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	PTPN20	Q4JDL3	420 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SYCP2L	Q5T4T6	812 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	AGBL2	Q5U5Z8	902 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	CDCA2	Q69YH5	1023 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	SLFN12L	Q6IEE8	588 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	C6orf89	Q6UWU4	347 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	CCDC121	Q6ZUS5	278 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	ENOSF1	Q7L5Y1	443 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	DPH6	Q7L8W6	267 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	EXOC3L1	Q86VI1	746 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	FAM228A	Q86W67	206 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	C1orf127	Q8N9H9	656 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	GIMAP7	Q8NHV1	300 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	FEZF2	Q8TBJ5	459 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MGARP	Q8TDB4	240 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MMP19	Q99542	508 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	FDXACB1	Q9BRP7	624 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MRPL4	Q9BYD3	311 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	CDT1	Q9H211	546 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	KIAA1586	Q9HCI6	787 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	ADARB2	Q9NS39	739 aa	Known RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	TBK1	Q9UHD2	729 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	MTUS1	Q9ULD2	1270 aa		6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	6.11	□□□□□ -1.43
LRRC49-223	ENST00000560369	PASK	Q96RG2	1323 aa		6.1	□□□□□ -1.43
LRRC49-223	ENST00000560369	GMNC	A6NCL1	334 aa		6.1	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms