RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 LAMA3Q16787 3333 aa13.13□□□□□ -0.31
USP8-209ENST00000560297 A0A1W2PQC6 194 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 C2orf71A6NGG8 1288 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 OR6C75A6NL08 312 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 C2CD2LO14523 706 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 C1RP00736 705 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 TRIM21P19474 475 aaKnown RBP13.12□□□□□ -0.31
USP8-209ENST00000560297 PCSK1P29120 753 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 ASPAP45381 313 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 MFAP3P55082 362 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 KCNMA1Q12791 1236 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 LRMPQ12912 555 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 CUL2Q13617 745 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 PTPN14Q15678 1187 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 PSMD5Q16401 504 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 CTXN3Q4LDR2 81 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 ZNF280DQ6N043 979 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 PHLDB3Q6NSJ2 640 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 UNC93AQ86WB7 457 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 PPM1KQ8N3J5 372 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 B3GALT6Q96L58 329 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 GAS2L1Q99501 681 aaPredicted RBP13.12□□□□□ -0.31
USP8-209ENST00000560297 ACBD6Q9BR61 282 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 UBE2TQ9NPD8 197 aaPredicted RBP13.12□□□□□ -0.31
USP8-209ENST00000560297 MTRRQ9UBK8 725 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 APEX2Q9UBZ4 518 aa13.12□□□□□ -0.31
USP8-209ENST00000560297 PDCD11Q14690 1871 aaKnown RBP13.12□□□□□ -0.31
USP8-209ENST00000560297 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 FSD2A1L4K1 749 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 TEX33O43247 280 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 TBC1D4O60343 1298 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 RFX1P22670 979 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 CA8P35219 290 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 IRS1P35568 1242 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 FXR1P51114 621 aaKnown RBP eCLIP13.11□□□□□ -0.31
USP8-209ENST00000560297 CDH8P55286 799 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 SYCP1Q15431 976 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 KLHDC7AQ5VTJ3 777 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 PLPP4Q5VZY2 271 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 SARM1Q6SZW1 724 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 PRSS55Q6UWB4 352 aaPredicted RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 DEFB123Q8N688 67 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 OR6B3Q8NGW1 331 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 KBTBD7Q8WVZ9 684 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 AUTS2Q8WXX7 1259 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 ELMO3Q96BJ8 720 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 PCMTD1Q96MG8 357 aaPredicted RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 FAM161BQ96MY7 647 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 CDCA3Q99618 268 aaPredicted RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 CLSTN3Q9BQT9 956 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 SMYD3Q9H7B4 428 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 DDX43Q9NXZ2 648 aaKnown RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 IFNKQ9P0W0 207 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 FBXL5Q9UKA1 691 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 CDH9Q9ULB4 789 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 BARX2Q9UMQ3 279 aaPredicted RBP13.11□□□□□ -0.31
USP8-209ENST00000560297 SIK3Q9Y2K2 1263 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 STXBP5LQ9Y2K9 1186 aa13.11□□□□□ -0.31
USP8-209ENST00000560297 A8MXQ7 604 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 ADH1AP07327 375 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 CNPP09543 421 aaKnown RBP13.1□□□□□ -0.31
USP8-209ENST00000560297 KLRC2P26717 231 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 NDUFV1P49821 464 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 PLCB2Q00722 1185 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 TSPY1Q01534 308 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 RAB33AQ14088 237 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 SCARA5Q6ZMJ2 495 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 RRAGAQ7L523 313 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 DCP1BQ8IZD4 617 aaKnown RBP13.1□□□□□ -0.31
USP8-209ENST00000560297 NEK11Q8NG66 645 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 TNIP3Q96KP6 325 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 KLHL5Q96PQ7 755 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 MRPL45Q9BRJ2 306 aaKnown RBP13.1□□□□□ -0.31
USP8-209ENST00000560297 LSM14BQ9BX40 385 aaKnown RBP13.1□□□□□ -0.31
USP8-209ENST00000560297 SDCBP2Q9H190 292 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 NSUN3Q9H649 340 aaKnown RBP13.1□□□□□ -0.31
USP8-209ENST00000560297 TLE6Q9H808 572 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 SIX2Q9NPC8 291 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 CISHQ9NSE2 258 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 MAFFQ9ULX9 164 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 GBF1Q92538 1859 aa13.1□□□□□ -0.31
USP8-209ENST00000560297 HIDE1A8MVS5 230 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 TEX28O15482 410 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 NCK2O43639 380 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 CILPO75339 1184 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 PDGFRBP09619 1106 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 UCHL3P15374 230 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 IGFBP4P22692 258 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 LMO2P25791 158 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 OR1D2P34982 312 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 SCN1AP35498 2009 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 RAP1GAPP47736 663 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 MAPRE1Q15691 268 aaKnown RBP13.09□□□□□ -0.31
USP8-209ENST00000560297 TPGS2Q68CL5 300 aa13.09□□□□□ -0.31
USP8-209ENST00000560297 DPY19L2P1Q6NXN4 242 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms