RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 MYL1P05976 194 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 CEBPBP17676 345 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 PTPN2P17706 415 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 PNPLA4P41247 253 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 CASP4P49662 377 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 RBP5P82980 135 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 PSMD6Q15008 389 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 CCDC142Q17RM4 750 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 DUOXA2Q1HG44 320 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 SLC39A12Q504Y0 691 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 PRSS36Q5K4E3 855 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 PARM1Q6UWI2 310 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 TRAPPC11Q7Z392 1133 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 BMP8AQ7Z5Y6 402 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 OSTM1Q86WC4 334 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 METTL23Q86XA0 190 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 WDR49Q8IV35 697 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 LRRC52Q8N7C0 313 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 FGF14Q92915 247 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 ANKRD36BP1Q96IX9 119 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 MFSD14AQ96MC6 490 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 OXCT2Q9BYC2 517 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 ZCWPW1Q9H0M4 648 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 DNAJC25Q9H1X3 360 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 DMAC2Q9NW81 257 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 IGSF9Q9P2J2 1179 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 DSEQ9UL01 958 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 MAFFQ9ULX9 164 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 MAPK8IP1Q9UQF2 711 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 SNX9Q9Y5X1 595 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 NUMBLQ9Y6R0 609 aa12.54□□□□□ -0.4
RABGGTA-216ENST00000560243 EXOC3O60645 756 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 MOSPD3O75425 235 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 CST3P01034 146 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 TNNC2P02585 160 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 GJA1P17302 382 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 TNNI1P19237 187 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 ACAT1P24752 427 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 VCPP55072 806 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 PNOCQ13519 176 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 SNW1Q13573 536 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 SURF1Q15526 300 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 SOWAHAQ2M3V2 549 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 THEM5Q8N1Q8 247 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 FBXL6Q8N531 539 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 ENGASEQ8NFI3 743 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 MCRS1Q96EZ8 462 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 HPDLQ96IR7 371 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 CGRRF1Q99675 332 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 KXD1Q9BQD3 176 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 AVENQ9NQS1 362 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 TMLHEQ9NVH6 421 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 GDAP2Q9NXN4 497 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 CGNQ9P2M7 1197 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 DUSP12Q9UNI6 340 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 KMT2EQ8IZD2 1858 aa12.53□□□□□ -0.4
RABGGTA-216ENST00000560243 PDXKO00764 312 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 HUS1O60921 280 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 NR3C1P04150 777 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 CFHP08603 1231 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 MYL4P12829 197 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 DLG4P78352 724 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 IER5LQ5T953 404 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 SMYD4Q8IYR2 804 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 GOLGA5Q8TBA6 731 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ERCC4Q92889 916 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ELMO3Q96BJ8 720 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ZNF512Q96ME7 567 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ZSWIM3Q96MP5 696 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 FNBP1Q96RU3 617 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 LRRC3Q9BY71 257 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ZNF334Q9HCZ1 680 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 ZFP37Q9Y6Q3 630 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 CACNA1HO95180 2353 aa12.52□□□□□ -0.41
RABGGTA-216ENST00000560243 GOLGA6L4A6NEF3 574 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 LRRIQ3A6PVS8 624 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ATP2C2O75185 946 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 GADD45BO75293 160 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ATF6P18850 670 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ALDH1A3P47895 512 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 EPHA5P54756 1037 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 MYO1EQ12965 1108 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 KCNB1Q14721 858 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 IQCEQ6IPM2 695 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 PDZD4Q76G19 769 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 LIMS2Q7Z4I7 341 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 DNAJB7Q7Z6W7 309 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 TMC8Q8IU68 726 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 SLC9A9Q8IVB4 645 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ADGRF2Q8IZF7 708 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 ELMOD1Q8N336 334 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 STKLD1Q8NE28 680 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 SHKBP1Q8TBC3 707 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 GPR152Q8TDT2 470 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 PARD3BQ8TEW8 1205 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 KBTBD7Q8WVZ9 684 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 NXPE3Q969Y0 559 aa12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 CCDC47Q96A33 483 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-216ENST00000560243 PKMYT1Q99640 499 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms