RNA–Protein interactions for RNA: ENST00000559573.3

FAM227B-208, Transcript of family with sequence similarity 227 member B, human

TSL 3

Gene FAM227B, Length 2,204 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM227B-208	ENST00000559573	CCDC195	A0A1B0GUA6	201 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	IL18RAP	O95256	599 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	GJA1	P17302	382 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	KCNA4	P22459	653 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	VAMP7	P51809	220 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	YWHAH	Q04917	246 aa	Predicted RBP	10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADCY1	Q08828	1119 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	SOWAHA	Q2M3V2	549 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	EFHB	Q8N7U6	833 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	SLC7A14	Q8TBB6	771 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	ANKRD36BP1	Q96IX9	119 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	RPGRIP1	Q96KN7	1286 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	SUSD3	Q96L08	255 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	SDCBP2	Q9H190	292 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	KCNF1	Q9H3M0	494 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	HOOK1	Q9UJC3	728 aa	Known RBP	10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	PAXBP1	Q9Y5B6	917 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	UBE4B	O95155	1302 aa		10.87	□□□□□ -0.67
FAM227B-208	ENST00000559573	C4BPA	P04003	597 aa	Known RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CPB1	P15086	417 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	SSTR3	P32745	418 aa	Predicted RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	RPL9	P32969	192 aa	Known RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	TAF6	P49848	677 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	SLC39A12	Q504Y0	691 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	ZNF394	Q53GI3	561 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	OVOS1	Q6IE37	1185 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	POTEH	Q6S545	545 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	MSLNL	Q96KJ4	702 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CGRRF1	Q99675	332 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	APOBEC3G	Q9HC16	384 aa	Known RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	SAMSN1	Q9NSI8	373 aa	Known RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	LMCD1	Q9NZU5	365 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	GTF3C4	Q9UKN8	822 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	USP15	Q9Y4E8	981 aa	Predicted RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	TSC2	P49815	1807 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	GLUD1	P00367	558 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	TNNC2	P02585	160 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	BMP1	P13497	986 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCNE1	P24864	410 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	DUSP4	Q13115	394 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	PAK1	Q13153	545 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CBX2	Q14781	532 aa	Predicted RBP	10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	DPH6	Q7L8W6	267 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	PIK3R5	Q8WYR1	880 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	TATDN2	Q93075	761 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CCDC34	Q96HJ3	373 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	ASB2	Q96Q27	587 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CRACR2A	Q9BSW2	395 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	LMAN2L	Q9H0V9	348 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	XYLT2	Q9H1B5	865 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	POMK	Q9H5K3	350 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573	CYP4F11	Q9HBI6	524 aa		10.86	□□□□□ -0.67
FAM227B-208	ENST00000559573		M0QZQ0	153 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	PSMA7	O14818	248 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	CD58	P19256	250 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	PSMC2	P35998	433 aa	Known RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	NCOA4	Q13772	614 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ANKRD54	Q6NXT1	300 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	USP37	Q86T82	979 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	IRF2BP1	Q8IU81	584 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	WDR49	Q8IV35	697 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	C12orf56	Q8IXR9	622 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	KREMEN2	Q8NCW0	462 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ZNF397	Q8NF99	534 aa	Predicted RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	KBTBD7	Q8WVZ9	684 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ING5	Q8WYH8	240 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	KAT5	Q92993	513 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	UROC1	Q96N76	676 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	EMILIN2	Q9BXX0	1053 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	S1PR5	Q9H228	398 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADAM7	Q9H2U9	754 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	MTRR	Q9UBK8	725 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	IRAK3	Q9Y616	596 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	MYBPHL	A2RUH7	354 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	TMEM189-UBE2V1	I3L0A0	370 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	CLDN5	O00501	218 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	CETN3	O15182	167 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	N4BP1	O75113	896 aa	Known RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	HLA-DRA	P01903	254 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ADH1A	P07327	375 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	C8A	P07357	584 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	CYP3A5	P20815	502 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ABCD1	P33897	745 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	AARS	P49588	968 aa	Known RBP eCLIP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	TRPC3	Q13507	836 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	GRASP	Q7Z6J2	395 aa	Predicted RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	SMRP1	Q8NCR6	262 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	TMEM30A	Q9NV96	361 aa		10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	DDX43	Q9NXZ2	648 aa	Known RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	ABI2	Q9NYB9	513 aa	Predicted RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	MTCL1	Q9Y4B5	1905 aa	Known RBP	10.85	□□□□□ -0.67
FAM227B-208	ENST00000559573	MYH10	P35580	1976 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	MBTPS2	O43462	519 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	TRAPPC3	O43617	180 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	PIK3CA	P42336	1068 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	CACNA2D1	P54289	1103 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	MRPS5	P82675	430 aa	Known RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	RBP5	P82980	135 aa		10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	FKBP3	Q00688	224 aa	Known RBP	10.84	□□□□□ -0.67
FAM227B-208	ENST00000559573	MTMR3	Q13615	1198 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms