RNA–Protein interactions for RNA: ENST00000559401.1

SNX1-207, Transcript of sorting nexin 1, humanhuman

TSL 2

Gene SNX1, Length 408 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-207ENST00000559401 SEPT5Q99719 369 aaPredicted RBP8.82□□□□□ -1
SNX1-207ENST00000559401 ASAH2Q9NR71 780 aa8.82□□□□□ -1
SNX1-207ENST00000559401 ABI2Q9NYB9 513 aaPredicted RBP8.82□□□□□ -1
SNX1-207ENST00000559401 CGNQ9P2M7 1197 aaKnown RBP8.82□□□□□ -1
SNX1-207ENST00000559401 SLC27A5Q9Y2P5 690 aa8.82□□□□□ -1
SNX1-207ENST00000559401 SNX9Q9Y5X1 595 aa8.82□□□□□ -1
SNX1-207ENST00000559401 ZFP37Q9Y6Q3 630 aaPredicted RBP8.82□□□□□ -1
SNX1-207ENST00000559401 NUMBLQ9Y6R0 609 aa8.82□□□□□ -1
SNX1-207ENST00000559401 KMT2EQ8IZD2 1858 aa8.81□□□□□ -1
SNX1-207ENST00000559401 FAM237AA0A1B0GTK4 181 aa8.81□□□□□ -1
SNX1-207ENST00000559401 STK25O00506 426 aa8.81□□□□□ -1
SNX1-207ENST00000559401 ZNF197O14709 1029 aa8.81□□□□□ -1
SNX1-207ENST00000559401 NARSO43776 548 aaKnown RBP8.81□□□□□ -1
SNX1-207ENST00000559401 CALUO43852 315 aaPredicted RBP8.81□□□□□ -1
SNX1-207ENST00000559401 PHACTR2O75167 634 aa8.81□□□□□ -1
SNX1-207ENST00000559401 PRPF40AO75400 957 aaKnown RBP8.81□□□□□ -1
SNX1-207ENST00000559401 SOAT2O75908 522 aa8.81□□□□□ -1
SNX1-207ENST00000559401 PAPLNO95428 1278 aa8.81□□□□□ -1
SNX1-207ENST00000559401 PDGFBP01127 241 aaPredicted RBP8.81□□□□□ -1
SNX1-207ENST00000559401 CYP11A1P05108 521 aa8.81□□□□□ -1
SNX1-207ENST00000559401 CEBPBP17676 345 aa8.81□□□□□ -1
SNX1-207ENST00000559401 ACAT1P24752 427 aaKnown RBP8.81□□□□□ -1
SNX1-207ENST00000559401 MYL7Q01449 175 aa8.81□□□□□ -1
SNX1-207ENST00000559401 TSPY1Q01534 308 aa8.81□□□□□ -1
SNX1-207ENST00000559401 BIRC3Q13489 604 aa8.81□□□□□ -1
SNX1-207ENST00000559401 HTR4Q13639 388 aa8.81□□□□□ -1
SNX1-207ENST00000559401 VEPH1Q14D04 833 aa8.81□□□□□ -1
SNX1-207ENST00000559401 PSMD6Q15008 389 aa8.81□□□□□ -1
SNX1-207ENST00000559401 TAF12Q16514 161 aa8.81□□□□□ -1
SNX1-207ENST00000559401 SLC5A9Q2M3M2 681 aa8.81□□□□□ -1
SNX1-207ENST00000559401 MGAT5BQ3V5L5 792 aa8.81□□□□□ -1
SNX1-207ENST00000559401 MTSS1LQ765P7 747 aa8.81□□□□□ -1
SNX1-207ENST00000559401 NPAS3Q8IXF0 933 aa8.81□□□□□ -1
SNX1-207ENST00000559401 DCP1BQ8IZD4 617 aaKnown RBP8.81□□□□□ -1
SNX1-207ENST00000559401 ADGRF2Q8IZF7 708 aa8.81□□□□□ -1
SNX1-207ENST00000559401 HS6ST3Q8IZP7 471 aa8.81□□□□□ -1
SNX1-207ENST00000559401 PDCL2Q8N4E4 241 aa8.81□□□□□ -1
SNX1-207ENST00000559401 TTC9BQ8N6N2 239 aa8.81□□□□□ -1
SNX1-207ENST00000559401 ATAD1Q8NBU5 361 aa8.81□□□□□ -1
SNX1-207ENST00000559401 FLCNQ8NFG4 579 aa8.81□□□□□ -1
SNX1-207ENST00000559401 NXPE3Q969Y0 559 aa8.81□□□□□ -1
SNX1-207ENST00000559401 ASIC4Q96FT7 647 aa8.81□□□□□ -1
SNX1-207ENST00000559401 HPDLQ96IR7 371 aa8.81□□□□□ -1
SNX1-207ENST00000559401 KXD1Q9BQD3 176 aa8.81□□□□□ -1
SNX1-207ENST00000559401 ZCWPW1Q9H0M4 648 aa8.81□□□□□ -1
SNX1-207ENST00000559401 SLITRK6Q9H5Y7 841 aa8.81□□□□□ -1
SNX1-207ENST00000559401 SIX4Q9UIU6 781 aa8.81□□□□□ -1
SNX1-207ENST00000559401 MAFFQ9ULX9 164 aa8.81□□□□□ -1
SNX1-207ENST00000559401 L1RE1Q9UN81 338 aa8.81□□□□□ -1
SNX1-207ENST00000559401 DUSP12Q9UNI6 340 aa8.81□□□□□ -1
SNX1-207ENST00000559401 MAPK8IP1Q9UQF2 711 aa8.81□□□□□ -1
SNX1-207ENST00000559401 NOTCH4Q99466 2003 aa8.81□□□□□ -1
SNX1-207ENST00000559401 VNN2O95498 520 aa8.8□□□□□ -1
SNX1-207ENST00000559401 NR3C1P04150 777 aa8.8□□□□□ -1
SNX1-207ENST00000559401 GJA1P17302 382 aa8.8□□□□□ -1
SNX1-207ENST00000559401 TNNC1P63316 161 aa8.8□□□□□ -1
SNX1-207ENST00000559401 DPYDQ12882 1025 aa8.8□□□□□ -1
SNX1-207ENST00000559401 TRPC3Q13507 836 aa8.8□□□□□ -1
SNX1-207ENST00000559401 PNOCQ13519 176 aa8.8□□□□□ -1
SNX1-207ENST00000559401 CEP135Q66GS9 1140 aa8.8□□□□□ -1
SNX1-207ENST00000559401 SCARA3Q6AZY7 606 aa8.8□□□□□ -1
SNX1-207ENST00000559401 CENPPQ6IPU0 288 aa8.8□□□□□ -1
SNX1-207ENST00000559401 PARM1Q6UWI2 310 aa8.8□□□□□ -1
SNX1-207ENST00000559401 TRAPPC11Q7Z392 1133 aa8.8□□□□□ -1
SNX1-207ENST00000559401 BMP8AQ7Z5Y6 402 aa8.8□□□□□ -1
SNX1-207ENST00000559401 C12orf56Q8IXR9 622 aa8.8□□□□□ -1
SNX1-207ENST00000559401 TMEM86AQ8N2M4 240 aa8.8□□□□□ -1
SNX1-207ENST00000559401 SLC44A3Q8N4M1 653 aa8.8□□□□□ -1
SNX1-207ENST00000559401 SPPL2BQ8TCT7 592 aa8.8□□□□□ -1
SNX1-207ENST00000559401 FGF14Q92915 247 aa8.8□□□□□ -1
SNX1-207ENST00000559401 TCEAL4Q96EI5 215 aa8.8□□□□□ -1
SNX1-207ENST00000559401 BORCS6Q96GS4 357 aa8.8□□□□□ -1
SNX1-207ENST00000559401 MMS19Q96T76 1030 aa8.8□□□□□ -1
SNX1-207ENST00000559401 RTP3Q9BQQ7 232 aa8.8□□□□□ -1
SNX1-207ENST00000559401 CRISPLD1Q9H336 500 aa8.8□□□□□ -1
SNX1-207ENST00000559401 DDX43Q9NXZ2 648 aaKnown RBP8.8□□□□□ -1
SNX1-207ENST00000559401 CEP72Q9P209 647 aa8.8□□□□□ -1
SNX1-207ENST00000559401 CA14Q9ULX7 337 aa8.8□□□□□ -1
SNX1-207ENST00000559401 FRMD4BQ9Y2L6 1034 aa8.8□□□□□ -1
SNX1-207ENST00000559401 PCDHB5Q9Y5E4 795 aa8.8□□□□□ -1
SNX1-207ENST00000559401 ANHXE9PGG2 379 aa8.79□□□□□ -1
SNX1-207ENST00000559401 PDXKO00764 312 aa8.79□□□□□ -1
SNX1-207ENST00000559401 RHOBTB3O94955 611 aa8.79□□□□□ -1
SNX1-207ENST00000559401 SRFP11831 508 aa8.79□□□□□ -1
SNX1-207ENST00000559401 PCSK1P29120 753 aa8.79□□□□□ -1
SNX1-207ENST00000559401 TUFMP49411 452 aaKnown RBP8.79□□□□□ -1
SNX1-207ENST00000559401 CASP4P49662 377 aa8.79□□□□□ -1
SNX1-207ENST00000559401 VCPP55072 806 aaKnown RBP8.79□□□□□ -1
SNX1-207ENST00000559401 FAM160A1Q05DH4 1040 aa8.79□□□□□ -1
SNX1-207ENST00000559401 SMARCB1Q12824 385 aa8.79□□□□□ -1
SNX1-207ENST00000559401 NFE2Q16621 373 aaPredicted RBP8.79□□□□□ -1
SNX1-207ENST00000559401 ITIH5Q86UX2 942 aa8.79□□□□□ -1
SNX1-207ENST00000559401 FMR1NBQ8N0W7 255 aaPredicted RBP8.79□□□□□ -1
SNX1-207ENST00000559401 SIX5Q8N196 739 aa8.79□□□□□ -1
SNX1-207ENST00000559401 TOP6BLQ8N6T0 577 aa8.79□□□□□ -1
SNX1-207ENST00000559401 LEMD2Q8NC56 503 aa8.79□□□□□ -1
SNX1-207ENST00000559401 GPR152Q8TDT2 470 aa8.79□□□□□ -1
SNX1-207ENST00000559401 GIPC2Q8TF65 315 aa8.79□□□□□ -1
SNX1-207ENST00000559401 C2orf15Q8WU43 125 aaKnown RBP8.79□□□□□ -1
SNX1-207ENST00000559401 FAM122AQ96E09 287 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms