RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 KRT17Q04695 432 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 WDR44Q5JSH3 913 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 FAM171A1Q5VUB5 890 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 WSCD1Q658N2 575 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ENOSF1Q7L5Y1 443 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 FBXO22Q8NEZ5 403 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 KAT5Q92993 513 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 FAM81BQ96LP2 452 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ARID3AQ99856 593 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 TTPALQ9BTX7 342 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ZNF576Q9H609 170 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 SMYD3Q9H7B4 428 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 ALG13Q9NP73 1137 aaKnown RBP15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 MTRRQ9UBK8 725 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 BACE2Q9Y5Z0 518 aa15.86■□□□□ 0.13
SNRPA1-207ENST00000559309 CBFA2T2O43439 604 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 CILPO75339 1184 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 C1RP00736 705 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 P4HA1P13674 534 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 GPM6BQ13491 265 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 ARID5BQ14865 1188 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 PTPN14Q15678 1187 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 VARS2Q5ST30 1063 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 SLC8B1Q6J4K2 584 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 RSPO2Q6UXX9 243 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 DSTYKQ6XUX3 929 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 VPS52Q8N1B4 723 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 APPL2Q8NEU8 664 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 POF1BQ8WVV4 589 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 SHC3Q92529 594 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 MRPL45Q9BRJ2 306 aaKnown RBP15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 OXCT2Q9BYC2 517 aaPredicted RBP15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 EDEM3Q9BZQ6 932 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 FNIP2Q9P278 1114 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 MUC3AQ02505 3323 aa15.85■□□□□ 0.13
SNRPA1-207ENST00000559309 PTPRDP23468 1912 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 HUS1O60921 280 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 LHX1P48742 406 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 GLUD2P49448 558 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 ZNF75DP51815 510 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 CDH8P55286 799 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 TNNC1P63316 161 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 IQCEQ6IPM2 695 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 PDE12Q6L8Q7 609 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 GJB7Q6PEY0 223 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 UNC93AQ86WB7 457 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 ADGRF2Q8IZF7 708 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 CRYBG2Q8N1P7 616 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 TTC39CQ8N584 583 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 CCDC150Q8NCX0 1101 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 BAP1Q92560 729 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 B3GALT6Q96L58 329 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 ACBD6Q9BR61 282 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 LSM14BQ9BX40 385 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 TLR9Q9NR96 1032 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 CISHQ9NSE2 258 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 LMCD1Q9NZU5 365 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 CEP72Q9P209 647 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 NXF1Q9UBU9 619 aaKnown RBP15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 BARX2Q9UMQ3 279 aaPredicted RBP15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 FHOD1Q9Y613 1164 aa15.84■□□□□ 0.13
SNRPA1-207ENST00000559309 A0A1W2PQJ5 194 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 WEE2P0C1S8 567 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 IRS1P35568 1242 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 LRMPQ12912 555 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 TBX2Q13207 712 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 PTPN21Q16825 1174 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 OVOS1Q6IE37 1185 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 FAM171BQ6P995 826 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 PDXDC1Q6P996 788 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 ANKS3Q6ZW76 656 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 RRAGAQ7L523 313 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 MRPL43Q8N983 215 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 OR10T2Q8NGX3 314 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 MAFAQ8NHW3 353 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 ARNTL2Q8WYA1 636 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 IQCDQ96DY2 449 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 TWNKQ96RR1 684 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 CLSTN3Q9BQT9 956 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 STK33Q9BYT3 514 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 GRPEL1Q9HAV7 217 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 NGRNQ9NPE2 291 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 PUF60Q9UHX1 559 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 DNAJC12Q9UKB3 198 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 MTUS1Q9ULD2 1270 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 MYO6Q9UM54 1294 aa15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 R3HCC1Q9Y3T6 440 aaKnown RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 TIMM13Q9Y5L4 95 aaPredicted RBP15.83■□□□□ 0.12
SNRPA1-207ENST00000559309 C2orf71A6NGG8 1288 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 RNF225M0QZC1 329 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 PES1O00541 588 aaKnown RBP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 PAPLNO95428 1278 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 TPM3P06753 285 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 LMO2P25791 158 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 CDC25BP30305 580 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 RAP1GAPP47736 663 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 YWHAHQ04917 246 aaPredicted RBP15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 FAM71AQ8IYT1 594 aa15.82■□□□□ 0.12
SNRPA1-207ENST00000559309 PPM1KQ8N3J5 372 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms