RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 SLC26A4O43511 780 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 NUDT17P0C025 328 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 WEE2P0C1S8 567 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 FAM86B2P0C5J1 330 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 BLVRAP53004 296 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 IFRD2Q12894 506 aaPredicted RBP7.46□□□□□ -1.21
USP3-210ENST00000559192 ZNF699Q32M78 642 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 RINLQ6ZS11 566 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 ZNF720Q7Z2F6 126 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 NOP9Q86U38 636 aaKnown RBP7.46□□□□□ -1.21
USP3-210ENST00000559192 ARID3BQ8IVW6 561 aaPredicted RBP7.46□□□□□ -1.21
USP3-210ENST00000559192 PRELID2Q8N945 189 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 PAFAH2Q99487 392 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 INO80BQ9C086 356 aaPredicted RBP7.46□□□□□ -1.21
USP3-210ENST00000559192 TMEM8AQ9HCN3 771 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 ARMCX1Q9P291 453 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 C2CD2Q9Y426 696 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 GJA3Q9Y6H8 435 aa7.46□□□□□ -1.21
USP3-210ENST00000559192 NCANO14594 1321 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 M0QYV0 167 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 NEMP1O14524 444 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 BANF1O75531 89 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 CALB2P22676 271 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 PTDSS1P48651 473 aaKnown RBP7.46□□□□□ -1.22
USP3-210ENST00000559192 GALNT4Q8N4A0 578 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 KAT5Q92993 513 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 ART4Q93070 314 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 KCNG1Q9UIX4 513 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 PRR12Q9ULL5 1215 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 ORC6Q9Y5N6 252 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 IGSF9BQ9UPX0 1349 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 PIAS1O75925 651 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 UNC5CO95185 931 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 GJB6O95452 261 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 ETS1P14921 441 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 PSMC5P62195 406 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 DNAL1Q4LDG9 190 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 ANO5Q75V66 913 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 ENOSF1Q7L5Y1 443 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 EEPD1Q7L9B9 569 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 C1orf131Q8NDD1 294 aaKnown RBP7.46□□□□□ -1.22
USP3-210ENST00000559192 CNBD2Q96M20 576 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 SLC4A9Q96Q91 983 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 RMDN3Q96TC7 470 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 SH3GL1Q99961 368 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 HESX1Q9UBX0 185 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 AGO2Q9UKV8 859 aaKnown RBP7.46□□□□□ -1.22
USP3-210ENST00000559192 PCDHA3Q9Y5H8 950 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 LMO7Q8WWI1 1683 aa7.46□□□□□ -1.22
USP3-210ENST00000559192 PIK3CDO00329 1044 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 APOA1P02647 267 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ATP6V1B1P15313 513 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 CDH6P55285 790 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PPP4CP60510 307 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 STX3Q13277 289 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 CNGA3Q16281 694 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 WASHC2DQ5SRD0 308 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 LRRC74BQ6ZQY2 392 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ALG3Q92685 438 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 NMD3Q96D46 503 aaKnown RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 PAGR1Q9BTK6 254 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 MED10Q9BTT4 135 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 MOV10L1Q9BXT6 1211 aaKnown RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 C10orf88Q9H8K7 445 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RNPEPL1Q9HAU8 725 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ETAA1Q9NY74 926 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PDP2Q9P2J9 529 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 NR2E1Q9Y466 385 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ANGPTL3Q9Y5C1 460 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 LOC100653049A0A140TA62 436 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 GNGT2O14610 69 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 KRT34O76011 436 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ZSCAN5DPP0CG00 497 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PRKCIP41743 596 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 CASP2P42575 452 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RASA2Q15283 850 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 Q4G0T1 1027 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 FSCBQ5H9T9 825 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 KCNT1Q5JUK3 1230 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 FAXCQ5TGI0 409 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TLK2Q86UE8 772 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 LDHDQ86WU2 507 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 SCUBE1Q8IWY4 988 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 PPIL6Q8IXY8 311 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 RASGEF1CQ8N431 466 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 C7orf31Q8N865 590 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 MCUQ8NE86 351 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 BTBD10Q9BSF8 475 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ZCWPW1Q9H0M4 648 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 AGAP1Q9UPQ3 857 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ANKRD63C9JTQ0 380 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 MGRN1O60291 552 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 GPC4O75487 556 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 DGKIO75912 1065 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 HLA-DRAP01903 254 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 KRT7P08729 469 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 ARP10275 920 aa7.45□□□□□ -1.22
USP3-210ENST00000559192 TBXAS1P24557 533 aaPredicted RBP7.45□□□□□ -1.22
USP3-210ENST00000559192 CLEC16AQ2KHT3 1053 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms