RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 C3orf20Q8ND61 904 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 CCHCR1Q8TD31 782 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 OSBPL8Q9BZF1 889 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 DCLK3Q9C098 648 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 KATNBL1Q9H079 304 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 CENPHQ9H3R5 247 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 PDZD7Q9H5P4 517 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 ZNF408Q9H9D4 720 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 DDX56Q9NY93 547 aaKnown RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 NXF1Q9UBU9 619 aaKnown RBP11.96□□□□□ -0.49
CLPX-204ENST00000559152 PTPN22Q9Y2R2 807 aa11.96□□□□□ -0.49
CLPX-204ENST00000559152 RRN3P2A6NIE6 340 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 LACTBL1A8MY62 500 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 TJP3O95049 919 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 IQCF3P0C7M6 154 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 HOXD8P13378 290 aaPredicted RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 ADCYAP1R1P41586 468 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 KRT17Q04695 432 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 KLF1Q13351 362 aaPredicted RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 IRF5Q13568 498 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 PTK6Q13882 451 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 GRB14Q14449 540 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 AMHR2Q16671 573 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 DGKDQ16760 1214 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 WDR72Q3MJ13 1102 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 KRT71Q3SY84 523 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 ZNF394Q53GI3 561 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 CEP128Q6ZU80 1094 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 GPR142Q7Z601 462 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 SH2D3CQ8N5H7 860 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 NIPA2Q8N8Q9 360 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 C1orf54Q8WWF1 131 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 NLRP7Q8WX94 980 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 USTQ9Y2C2 406 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 C2CD2Q9Y426 696 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 ZNFX1Q9P2E3 1918 aaKnown RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 TCRBV5S1A1TA0A578 114 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 RALAP11233 206 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 CD19P15391 556 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 KCNJ1P48048 391 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 PCBP1Q15365 356 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLPX-204ENST00000559152 FAM110CQ1W6H9 321 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 DNAJC21Q5F1R6 531 aaKnown RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 TRMT10CQ7L0Y3 403 aaKnown RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 PLEKHH3Q7Z736 793 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 CEP120Q8N960 986 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 CCDC89Q8N998 374 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 C1orf127Q8N9H9 656 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 BRI3BPQ8WY22 251 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 SNF8Q96H20 258 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 MAML3Q96JK9 1138 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 ZNF668Q96K58 619 aaPredicted RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 SCLT1Q96NL6 688 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 ACAP3Q96P50 834 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 STMN4Q9H169 189 aaPredicted RBP11.95□□□□□ -0.5
CLPX-204ENST00000559152 ITGA11Q9UKX5 1188 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 KIAA1257Q9ULG3 409 aa11.95□□□□□ -0.5
CLPX-204ENST00000559152 A0A1B0GUA9 196 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 NDC80O14777 642 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ITGB3P05106 788 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 NFICP08651 508 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ARF4P18085 180 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 PTPN7P35236 360 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 GSCP56915 257 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 TAS2R40P59535 323 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ACVR2BQ13705 512 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 BYSLQ13895 437 aaKnown RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 TMEM132DQ14C87 1099 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 GRIK4Q16099 956 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 DCAF4L1Q3SXM0 396 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 PPP1R15BQ5SWA1 713 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 JADE1Q6IE81 842 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 LLGL2Q6P1M3 1020 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 SCARA5Q6ZMJ2 495 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ZNF365Q70YC5 407 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 C2orf69Q8N8R5 385 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 OR2W6PQ8NHA6 318 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 FNIP1Q8TF40 1166 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 MCEEQ96PE7 176 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 TINF2Q9BSI4 451 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 TMEM109Q9BVC6 243 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 MIS12Q9H081 205 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ASIC3Q9UHC3 531 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 SIX4Q9UIU6 781 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 SLC15A5A6NIM6 579 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 MMP3P08254 477 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ZNF286BP0CG31 522 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ATF2P15336 505 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 SSTR3P32745 418 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 MDH1P40925 334 aaKnown RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 RPL7AP62424 266 aaKnown RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 RBP5P82980 135 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 ADCY2Q08462 1091 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 NFX1Q12986 1120 aaKnown RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 SNX1Q13596 522 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 GJC2Q5T442 439 aaPredicted RBP11.94□□□□□ -0.5
CLPX-204ENST00000559152 ZFYVE27Q5T4F4 411 aa11.94□□□□□ -0.5
CLPX-204ENST00000559152 C6orf118Q5T5N4 469 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms