RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 GLUD1P00367 558 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 KRT13P13646 458 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 ACAT1P24752 427 aaKnown RBP12.28□□□□□ -0.44
SNX1-204ENST00000559061 LMO2P25791 158 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 GTF2H1P32780 548 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 AP3M2P53677 418 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 BIRC3Q13489 604 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 ZNF280DQ6N043 979 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 APPL2Q8NEU8 664 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 SUSD6Q92537 303 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 CNOT6LQ96LI5 555 aaKnown RBP12.28□□□□□ -0.44
SNX1-204ENST00000559061 LPIN3Q9BQK8 851 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 APOL5Q9BWW9 433 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 SAMSN1Q9NSI8 373 aaKnown RBP12.28□□□□□ -0.44
SNX1-204ENST00000559061 THEGQ9P2T0 379 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 HMGXB4Q9UGU5 601 aa12.28□□□□□ -0.44
SNX1-204ENST00000559061 GREB1Q4ZG55 1949 aa12.27□□□□□ -0.44
SNX1-204ENST00000559061 MBTPS2O43462 519 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 NCK2O43639 380 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ATP2C2O75185 946 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 C1RP00736 705 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 WEE2P0C1S8 567 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 IL9P15248 144 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 WARSP23381 471 aaKnown RBP12.27□□□□□ -0.45
SNX1-204ENST00000559061 PAX3P23760 479 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ATICP31939 592 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 PIK3CAP42336 1068 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 FMO5P49326 533 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 MXI1P50539 228 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 CDH8P55286 799 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 NOP14P78316 857 aaKnown RBP12.27□□□□□ -0.45
SNX1-204ENST00000559061 CREMQ03060 361 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 STX1AQ16623 288 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ZNF699Q32M78 642 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 WDR72Q3MJ13 1102 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 HSP90AA4PQ58FG1 418 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 MIIPQ5JXC2 388 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 CDKAL1Q5VV42 579 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 KRT39Q6A163 491 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 DPY19L2P1Q6NXN4 242 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 PDXDC1Q6P996 788 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ADGRF2Q8IZF7 708 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 KREMEN2Q8NCW0 462 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ENOX1Q8TC92 643 aaKnown RBP12.27□□□□□ -0.45
SNX1-204ENST00000559061 CASP10Q92851 521 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 PPP2R3CQ969Q6 453 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 ARID3AQ99856 593 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 BCO2Q9BYV7 579 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 DPEP3Q9H4B8 488 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 CRTAC1Q9NQ79 661 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 COG5Q9UP83 839 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 PATJQ8NI35 1801 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 OBSL1O75147 1896 aa12.27□□□□□ -0.45
SNX1-204ENST00000559061 DOCK8Q8NF50 2099 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 MUC3AQ02505 3323 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 SYCE3A1L190 88 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 MTMR11A4FU01 709 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 OR6C75A6NL08 312 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 H7C4K7 107 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 PMM2O15305 246 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 TACC1O75410 805 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 BMP1P13497 986 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 ARPP19P56211 112 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 APBA1Q02410 837 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 MYO1EQ12965 1108 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 GPR17Q13304 367 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 CCDC40Q4G0X9 1142 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 CT47A1Q5JQC4 288 aaPredicted RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 SCARA5Q6ZMJ2 495 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 APTXQ7Z2E3 356 aaKnown RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 PPFIBP1Q86W92 1011 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.26□□□□□ -0.45
SNX1-204ENST00000559061 DHX40Q8IX18 779 aaKnown RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 UBR7Q8N806 425 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 ZNF461Q8TAF7 563 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 WHAMMQ8TF30 809 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 TATDN2Q93075 761 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 SYAP1Q96A49 352 aaPredicted RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 PGLYRP2Q96PD5 576 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 TWNKQ96RR1 684 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 RHOBTB2Q9BYZ6 727 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 THAP9Q9H5L6 903 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 METTL14Q9HCE5 456 aaKnown RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 TMEM30AQ9NV96 361 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 ANO10Q9NW15 660 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 DDX43Q9NXZ2 648 aaKnown RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 NXF1Q9UBU9 619 aaKnown RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 CD207Q9UJ71 328 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 DSEQ9UL01 958 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 NFE2L3Q9Y4A8 694 aa12.26□□□□□ -0.45
SNX1-204ENST00000559061 USP15Q9Y4E8 981 aaPredicted RBP12.26□□□□□ -0.45
SNX1-204ENST00000559061 ARHGEF37A1IGU5 675 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 MYBPHLA2RUH7 354 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 PHACTR2O75167 634 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ZMYND10O75800 440 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 SOAT2O75908 522 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ATF2P15336 505 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 ZNF18P17022 549 aa12.25□□□□□ -0.45
SNX1-204ENST00000559061 PSMC1P62191 440 aaKnown RBP12.25□□□□□ -0.45
SNX1-204ENST00000559061 MYL7Q01449 175 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms