RNA–Protein interactions for RNA: ENST00000558966.5

CTDSPL2-204, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 1,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-204ENST00000558966 TTC26A0AVF1 554 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TADA2AO75478 443 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 AVPP01185 164 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLTAP09496 248 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 IDEP14735 1019 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 PCSK2P16519 638 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 HOXB8P17481 243 aaPredicted RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 GAP43P17677 238 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 RPL17P18621 184 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 KLRC2P26717 231 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 MATR3P43243 847 aaKnown RBP eCLIP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ME1P48163 572 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLCN4P51793 760 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CLCNKBP51801 687 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CASP5P51878 434 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ENOX2Q16206 610 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 UPP1Q16831 310 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 USP41Q3LFD5 358 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 RTP2Q5QGT7 225 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 RESP18Q5W5W9 173 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 KANK3Q6NY19 840 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 C12orf76Q8N812 135 aaPredicted RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 ALKBH8Q96BT7 664 aaKnown RBP6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 HVCN1Q96D96 273 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 FBXL18Q96ME1 805 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 EMILIN2Q9BXX0 1053 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TRIM9Q9C026 710 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TNMDQ9H2S6 317 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CUEDC2Q9H467 287 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 RXFP1Q9HBX9 757 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 NEUROD4Q9HD90 331 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 OLFML3Q9NRN5 406 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TBC1D7Q9P0N9 293 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 PRKAG3Q9UGI9 489 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 TUBGCP4Q9UGJ1 667 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 CFAP45Q9UL16 551 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 STYXL1Q9Y6J8 313 aa6.56□□□□□ -1.36
CTDSPL2-204ENST00000558966 MTCL1Q9Y4B5 1905 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 OGTO15294 1046 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 POLR2DO15514 142 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 B3GAT3O94766 335 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 MYBP10242 640 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 CASP1P29466 404 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADSSP30520 456 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 ABCD1P33897 745 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 SPAG1Q07617 926 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 ORC1Q13415 861 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 CBX2Q14781 532 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 HIF1AQ16665 826 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 HERC4Q5GLZ8 1057 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 RARS2Q5T160 578 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 L1TD1Q5T7N2 865 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 FAM171A1Q5VUB5 890 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 KIAA1841Q6NSI8 718 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 DCLRE1AQ6PJP8 1040 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 PRSS55Q6UWB4 352 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 PPFIBP1Q86W92 1011 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 GPR65Q8IYL9 337 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 IQUBQ8NA54 791 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 TMEM87AQ8NBN3 555 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 GLIS3Q8NEA6 775 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 TTC16Q8NEE8 873 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 LEO1Q8WVC0 666 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 RIN2Q8WYP3 895 aaPredicted RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 PIK3R5Q8WYR1 880 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 UROC1Q96N76 676 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 DUSP9Q99956 384 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 TTPALQ9BTX7 342 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 MSTO1Q9BUK6 570 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 MRPL44Q9H9J2 332 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 PLEKHA5Q9HAU0 1116 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 SLC38A7Q9NVC3 462 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 PANK4Q9NVE7 773 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 DZANK1Q9NVP4 752 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 FNIP2Q9P278 1114 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 CPSF3Q9UKF6 684 aaKnown RBP6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 SSX2IPQ9Y2D8 614 aa6.55□□□□□ -1.36
CTDSPL2-204ENST00000558966 DOCK6Q96HP0 2047 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 A0A1B0GTH6 734 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 LACTBL1A8MY62 500 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 LOC730098B7Z3J9 87 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 I3L4J1 428 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 PODXLO00592 558 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADAM12O43184 909 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 GCNT3O95395 438 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 RECKO95980 971 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ADRB2P07550 413 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 WEE2P0C1S8 567 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 FGFR3P22607 806 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 BRCC3P46736 316 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ACOT2P49753 483 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ITIH3Q06033 890 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ELAVL2Q12926 359 aaKnown RBP6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 ZBTB6Q15916 424 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 KYAT1Q16773 422 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 TSNAXIP1Q2TAA8 658 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 WDR44Q5JSH3 913 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 CNNM4Q6P4Q7 775 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 TMC5Q6UXY8 1006 aa6.54□□□□□ -1.36
CTDSPL2-204ENST00000558966 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms