RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 AXLP30530 894 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 ADH7P40394 386 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 PLAURQ03405 335 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 MXD4Q14582 209 aaPredicted RBP10.7□□□□□ -0.7
SPG11-212ENST00000558790 PCBP1Q15365 356 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPG11-212ENST00000558790 EPHA7Q15375 998 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 USP41Q3LFD5 358 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 RTP2Q5QGT7 225 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 LYPD4Q6UWN0 246 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 SLCO4C1Q6ZQN7 724 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 PIK3AP1Q6ZUJ8 805 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 CDR2LQ86X02 465 aaPredicted RBP10.7□□□□□ -0.7
SPG11-212ENST00000558790 PJA1Q8NG27 643 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 HASPINQ8TF76 798 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 SEMA4AQ9H3S1 761 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 PLEKHA4Q9H4M7 779 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 ZSWIM4Q9H7M6 989 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 SLC2A4RGQ9NR83 387 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPG11-212ENST00000558790 GJB4Q9NTQ9 266 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.7□□□□□ -0.7
SPG11-212ENST00000558790 GIT1Q9Y2X7 761 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 IGSF10Q6WRI0 2623 aa10.7□□□□□ -0.7
SPG11-212ENST00000558790 SPAG17Q6Q759 2223 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 SF3B1O75533 1304 aaKnown RBP eCLIP10.69□□□□□ -0.7
SPG11-212ENST00000558790 EIF1AYO14602 144 aaKnown RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 TBX3O15119 743 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 LRRN2O75325 713 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 REC8O95072 547 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 NPTXRO95502 500 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 SP9P0CG40 484 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 CES1P23141 567 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 CREMQ03060 361 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 GRIK3Q13003 919 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 TFDP1Q14186 410 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 EARS2Q5JPH6 523 aaKnown RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 LILRA6Q6PI73 481 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 DCLRE1AQ6PJP8 1040 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 ZC3H14Q6PJT7 736 aaKnown RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 PRSS55Q6UWB4 352 aaPredicted RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 OTUD6AQ7L8S5 288 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 FGF14Q92915 247 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 TNFRSF25Q93038 417 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 ZNF274Q96GC6 653 aaPredicted RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 PAAF1Q9BRP4 392 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 RPP25Q9BUL9 199 aaKnown RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 COLEC11Q9BWP8 271 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 FNIP2Q9P278 1114 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 GDF2Q9UK05 429 aaPredicted RBP10.69□□□□□ -0.7
SPG11-212ENST00000558790 FBXW11Q9UKB1 542 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 SLC6A14Q9UN76 642 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 SIT1Q9Y3P8 196 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 ANK1P16157 1881 aa10.69□□□□□ -0.7
SPG11-212ENST00000558790 KIF26AQ9ULI4 1882 aaPredicted RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 STK36Q9NRP7 1315 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 J3QW42 95 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 KIF4AO95239 1232 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 C1RP00736 705 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 GLRA2P23416 452 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 NRLP54845 237 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 NTHL1P78549 312 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 SCRN1Q12765 414 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 HSP90AA2PQ14568 343 aaPredicted RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 SLC27A1Q6PCB7 646 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 CPLX2Q6PUV4 134 aaKnown RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 PARM1Q6UWI2 310 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 GRASPQ7Z6J2 395 aaPredicted RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 C1orf210Q8IVY1 113 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 TPH2Q8IWU9 490 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 GPR65Q8IYL9 337 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 HACE1Q8IYU2 909 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 MAML2Q8IZL2 1156 aaPredicted RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 MDFIQ99750 246 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 EIF2AK1Q9BQI3 630 aaKnown RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 NFKBIZQ9BYH8 718 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 POLR3FQ9H1D9 316 aaPredicted RBP10.68□□□□□ -0.7
SPG11-212ENST00000558790 NAGPAQ9UK23 515 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 CYP46A1Q9Y6A2 500 aa10.68□□□□□ -0.7
SPG11-212ENST00000558790 CASTOR2A6NHX0 329 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 MARCH6O60337 910 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 CPNE3O75131 537 aaKnown RBP10.67□□□□□ -0.7
SPG11-212ENST00000558790 SLITRK3O94933 977 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 C8AP07357 584 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 CELA2BP08218 269 aaPredicted RBP10.67□□□□□ -0.7
SPG11-212ENST00000558790 EPXP11678 715 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 ARL2P36404 184 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 RARRES1P49788 294 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 STARD6P59095 220 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 GPC5P78333 572 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 GPLD1P80108 840 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 POU5F1BQ06416 359 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 NCBP1Q09161 790 aaKnown RBP10.67□□□□□ -0.7
SPG11-212ENST00000558790 PSMD5Q16401 504 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 LIN9Q5TKA1 542 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 SLFN12Q8IYM2 578 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 GALNT6Q8NCL4 622 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 NAP1L4Q99733 375 aaKnown RBP10.67□□□□□ -0.7
SPG11-212ENST00000558790 CLSTN3Q9BQT9 956 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
SPG11-212ENST00000558790 CDH7Q9ULB5 785 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms