RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 OR10T2Q8NGX3 314 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 TAS1R2Q8TE23 839 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 SLC35C1Q96A29 364 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 MMS19Q96T76 1030 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 ADAM7Q9H2U9 754 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 SFXN1Q9H9B4 322 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 TMEM8AQ9HCN3 771 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 NXF1Q9UBU9 619 aaKnown RBP13.41□□□□□ -0.26
LRRC28-206ENST00000558471 DPP7Q9UHL4 492 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 CDH22Q9UJ99 828 aa13.41□□□□□ -0.26
LRRC28-206ENST00000558471 UNC80Q8N2C7 3258 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 CCDC195A0A1B0GUA6 201 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 GABRDO14764 452 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 HCRTO43612 131 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ZMYND10O75800 440 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 SEC24AO95486 1093 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 GNA14O95837 355 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 WEE2P0C1S8 567 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 CPB1P15086 417 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ATF2P15336 505 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ERCC5P28715 1186 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-206ENST00000558471 PIK3CAP42336 1068 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ITIH3Q06033 890 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 GPR17Q13304 367 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ZNF699Q32M78 642 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 TJAP1Q5JTD0 557 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 TPGS2Q68CL5 300 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 KRT39Q6A163 491 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 CAVIN1Q6NZI2 390 aaKnown RBP13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ELMSAN1Q6PJG2 1045 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 SASS6Q6UVJ0 657 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 RNF19BQ6ZMZ0 732 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 LRRTM3Q86VH5 581 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ADGRF2Q8IZF7 708 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 KBTBD7Q8WVZ9 684 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 SEMA4DQ92854 862 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 PI4K2AQ9BTU6 479 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 ZCWPW1Q9H0M4 648 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 DDX43Q9NXZ2 648 aaKnown RBP13.4□□□□□ -0.26
LRRC28-206ENST00000558471 POLIQ9UNA4 740 aa13.4□□□□□ -0.26
LRRC28-206ENST00000558471 USP15Q9Y4E8 981 aaPredicted RBP13.4□□□□□ -0.26
LRRC28-206ENST00000558471 STX10O60499 249 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 VNN2O95498 520 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 FGFR1OPO95684 399 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ASS1P00966 412 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 C8AP07357 584 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ACAT1P24752 427 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 LMO2P25791 158 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ELF1P32519 619 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 LHX1P48742 406 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 MXI1P50539 228 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CDR1P51861 262 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 MARSP56192 900 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 TNNC1P63316 161 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ADCY1Q08828 1119 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 SMAD2Q15796 467 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 KLHL40Q2TBA0 621 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 UVSSAQ2YD98 709 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CBWD6Q4V339 395 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ZNF667Q5HYK9 610 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CBWD3Q5JTY5 395 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CBWD5Q5RIA9 395 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 SPOPLQ6IQ16 392 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CES5AQ6NT32 575 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 GPR149Q86SP6 731 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 IRF2BP1Q8IU81 584 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 TRIM59Q8IWR1 403 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 TCEAL8Q8IYN2 117 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CMASQ8NFW8 434 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 SLC7A14Q8TBB6 771 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 SPATA18Q8TC71 538 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 SUSD6Q92537 303 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 TAF4BQ92750 862 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ZNF707Q96C28 371 aaPredicted RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 PGLYRP2Q96PD5 576 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 ACBD6Q9BR61 282 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 MRPL45Q9BRJ2 306 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 CYP4F11Q9HBI6 524 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.39□□□□□ -0.277e-8■■■■■ 186.3
LRRC28-206ENST00000558471 AFF4Q9UHB7 1163 aaKnown RBP13.39□□□□□ -0.27
LRRC28-206ENST00000558471 NME7Q9Y5B8 376 aa13.39□□□□□ -0.27
LRRC28-206ENST00000558471 TACC1O75410 805 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CLSTN1O94985 981 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 PAPLNO95428 1278 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 FAM163BP0C2L3 166 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CCDC192P0DO97 292 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 PTMSP20962 102 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 WARSP23381 471 aaKnown RBP13.38□□□□□ -0.27
LRRC28-206ENST00000558471 GNL1P36915 607 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-206ENST00000558471 FMO5P49326 533 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CDH8P55286 799 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 MYL7Q01449 175 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 TPD52L1Q16890 204 aaPredicted RBP13.38□□□□□ -0.27
LRRC28-206ENST00000558471 SLC39A12Q504Y0 691 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 PPM1LQ5SGD2 360 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 ATAT1Q5SQI0 421 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms