RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 CDH22Q9UJ99 828 aa13.27□□□□□ -0.29
SMAD3-205ENST00000558428 PRRG1O14668 218 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ABLIM3O94929 683 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 VNN1O95497 513 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 STAU1O95793 577 aaKnown RBP13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ATF2P15336 505 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ATICP31939 592 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 PIK3CAP42336 1068 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 MTHFRP42898 656 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 TNNC1P63316 161 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 PPP3CAQ08209 521 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ADCY1Q08828 1119 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 CBX2Q14781 532 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-205ENST00000558428 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ZNF699Q32M78 642 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 WDR72Q3MJ13 1102 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC40Q4G0X9 1142 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 DCAF17Q5H9S7 520 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-205ENST00000558428 PPM1LQ5SGD2 360 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ATAT1Q5SQI0 421 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 TCERG1LQ5VWI1 586 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 RNF19BQ6ZMZ0 732 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 C15orf39Q6ZRI6 1047 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC149Q6ZUS6 474 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 DPH6Q7L8W6 267 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 FILIP1Q7Z7B0 1213 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 GPR149Q86SP6 731 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 OR10T2Q8NGX3 314 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 RTP3Q9BQQ7 232 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 XYLT2Q9H1B5 865 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 CYP4F11Q9HBI6 524 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 TMEM8AQ9HCN3 771 aa13.26□□□□□ -0.29
SMAD3-205ENST00000558428 ARMCX3Q9UH62 379 aaPredicted RBP13.26□□□□□ -0.29
SMAD3-205ENST00000558428 AFF4Q9UHB7 1163 aaKnown RBP13.26□□□□□ -0.29
SMAD3-205ENST00000558428 CCL16O15467 120 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 STX10O60499 249 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 HLA-DRAP01903 254 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 GTF2H1P32780 548 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 LHX1P48742 406 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 MXI1P50539 228 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 NLRP12P59046 1061 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 MYL7Q01449 175 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 TSPY1Q01534 308 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 GPR17Q13304 367 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 UVSSAQ2YD98 709 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 DPCR1Q3MIW9 517 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 SLC39A12Q504Y0 691 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 OSTM1Q86WC4 334 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 SPATA18Q8TC71 538 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 SMG7Q92540 1137 aaKnown RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 ZNF707Q96C28 371 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 NECTIN4Q96NY8 510 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 NECAB3Q96P71 396 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 PGLYRP2Q96PD5 576 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 UHRF1Q96T88 793 aaPredicted RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 SRRTQ9BXP5 876 aaKnown RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 PRKD2Q9BZL6 878 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 ZCWPW1Q9H0M4 648 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 POMKQ9H5K3 350 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 VRTNQ9H8Y1 702 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 PIDD1Q9HB75 910 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 METTL14Q9HCE5 456 aaKnown RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 DDX43Q9NXZ2 648 aaKnown RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 NXF1Q9UBU9 619 aaKnown RBP13.25□□□□□ -0.29
SMAD3-205ENST00000558428 DACH1Q9UI36 760 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 RWDD2AQ9UIY3 292 aa13.25□□□□□ -0.29
SMAD3-205ENST00000558428 MTMR11A4FU01 709 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 GABRDO14764 452 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 SEC24AO95486 1093 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 FGFR1OPO95684 399 aaKnown RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 LRG1P02750 347 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 HNRNPA1P09651 372 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 WARSP23381 471 aaKnown RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 ACAT1P24752 427 aaKnown RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 HOXA9P31269 272 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 MCCD1P59942 119 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 SGSM1Q2NKQ1 1148 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 CCDC183Q5T5S1 534 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 KRT39Q6A163 491 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 CYP26C1Q6V0L0 522 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 RBM43Q6ZSC3 357 aaKnown RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 RTL10Q7L3V2 364 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 LIMS2Q7Z4I7 341 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 FRMD5Q7Z6J6 570 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 ADHFE1Q8IWW8 467 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 TCEAL8Q8IYN2 117 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 DCP1BQ8IZD4 617 aaKnown RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 KBTBD7Q8WVZ9 684 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 ELMO3Q96BJ8 720 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 ACBD6Q9BR61 282 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 PHF7Q9BWX1 381 aaPredicted RBP13.24□□□□□ -0.29
SMAD3-205ENST00000558428 IMPG2Q9BZV3 1241 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 PRKAG3Q9UGI9 489 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 MAFFQ9ULX9 164 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 POLIQ9UNA4 740 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 INSL5Q9Y5Q6 135 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 DENND4AQ7Z401 1863 aa13.24□□□□□ -0.29
SMAD3-205ENST00000558428 MUC3AQ02505 3323 aa13.23□□□□□ -0.29
SMAD3-205ENST00000558428 HCRTO43612 131 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms